RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Slc39a3Q99K24 317 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 4930513O06RikQ9D549 161 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rab11fip1Q9D620 645 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 BcamQ9R069 622 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Bloc1s6Q9R0C0 172 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nrf1Q9WU00 503 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 PdynO35417 248 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Lmnb1P14733 588 aaKnown RBP14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Slc39a11Q8BWY7 342 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rwdd4Q9CPR1 188 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 4933425L06RikQ9D3Z8 585 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Mss51Q9D5Z5 446 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Borcs5Q9D920 195 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tnfrsf21Q9EPU5 655 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm29276A0A087WNW5 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21117A0A087WPJ9 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm20820A0A087WPP3 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm20937A0A087WQA3 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21258A0A087WQC7 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm28102A0A087WQL3 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21095A0A087WR14 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm20792A0A087WRF5 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21865A0A087WRL2 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm28576A0A087WRP6 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm28490A0A087WRT9 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21294A0A087WS79 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm20824A0A087WS97 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21996A0A087WSS9 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm28870A0A0A6YW38 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm29866A0A0A6YX04 222 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm5478D3Z6R0 159 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vmn2r31L7N1Z4 861 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Clcn3P51791 818 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Atp5bP56480 529 aaKnown RBP14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Klra6Q60653 266 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 MelkQ61846 643 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Mfn2Q80U63 757 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21627Q810R0 219 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Noc4lQ8BHY2 516 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Atp6v1hQ8BVE3 483 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tmem154Q8C4Q9 181 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pgam1Q9DBJ1 254 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Hmg20aQ9DC33 346 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Orc6Q9WUJ8 262 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 NhsB1AV60 1647 aa14.31□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Iqgap1Q9JKF1 1657 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm21488A0A087WR99 222 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Tex28B1AYN9 409 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Trim30bE9PVL6 203 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Olfm1O88998 485 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Vps26aP40336 327 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Proser1Q5PRE5 913 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Zfp90Q61967 636 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Prkag3Q8BGM7 489 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ythdf3Q8BYK6 585 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Camkk2Q8C078 588 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Elp3Q9CZX0 547 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Hes6Q9JHE6 224 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Mettl1Q9Z120 268 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gm11983V9GXS8 105 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Acot1O55137 419 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Il1aP01582 270 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 ArP19091 899 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Glt6d1Q2NKH9 311 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Alkbh5Q3TSG4 395 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kctd21Q3URF8 260 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Myl6Q60605 151 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ahcyl1Q80SW1 530 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 GskipQ8BGR8 139 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nckap1lQ8K1X4 1134 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Akr1c21Q91WR5 323 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Necab2Q91ZP9 389 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 MmadhcQ99LS1 296 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nol3Q9D1X0 220 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nfu1Q9QZ23 255 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 CluhQ5SW19 1315 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Surf2P09926 257 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Csnk2bP67871 215 aaKnown RBP14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Pkn1P70268 946 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 PrlrQ08501 608 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Akr1clQ3UXL1 322 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 P3h1Q3V1T4 739 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Defa17Q64016 82 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 BspryQ80YW5 473 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ints5Q8CHT3 1018 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 DaglbQ91WC9 669 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Kctd14A0A0U1RNG7 287 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Nedd1P33215 660 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Zfp607aQ3TQG9 686 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Sh3bp5lQ99LH9 392 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Acot13Q9CQR4 140 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Ddit4Q9D3F7 229 aa14.3□□□□□ -0.12
Col3a1-201ENSMUST00000087883 H2-Eb1P04230 264 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rpl5P47962 297 aaKnown RBP14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Rfx4Q7TNK1 735 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Zbtb5Q7TQG0 670 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gprc5cQ8K3J9 440 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Atp5f1Q9CQQ7 256 aaKnown RBP14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Fam187aQ9D3R5 417 aa14.29□□□□□ -0.12
Col3a1-201ENSMUST00000087883 Gsdmdc1Q9D8T2 487 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms