RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 KRT35Q92764 455 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 NTAN1Q96AB6 310 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CAPZA3Q96KX2 299 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 GAS2L1Q99501 681 aaPredicted RBP8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CALN1Q9BXU9 219 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CCSER2Q9H7U1 834 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PIGVQ9NUD9 493 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 OSER1Q9NX31 292 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SFMBT1Q9UHJ3 866 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 NUDT5Q9UKK9 219 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 AP4E1Q9UPM8 1137 aa8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 HBS1LQ9Y450 684 aaKnown RBP8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 COL4A4P53420 1690 aaPredicted RBP8.87□□□□□ -0.99
SOX9-AS1-217ENST00000623935 LAMA2P24043 3122 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CLUHO75153 1309 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TRAV19A0A0A6YYK7 116 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 GOLGA6L10A0A0M3HER8 536 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SLC12A8A0AV02 714 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PGRMC1O00264 195 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 F11P03951 625 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 HOXB8P17481 243 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 HDCP19113 662 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TFE3P19532 575 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ADRA1BP35368 520 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ARL4AP40617 200 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ZNF135P52742 658 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CDH6P55285 790 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 AMPD2Q01433 879 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PDAP1Q13442 181 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TRIP4Q15650 581 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 LONRF2Q1L5Z9 754 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PPP6R3Q5H9R7 873 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PRPF38BQ5VTL8 546 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 NUGGCQ68CJ6 796 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 BNIPLQ7Z465 357 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CPNE8Q86YQ8 564 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ARFGAP1Q8N6T3 406 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 EFHBQ8N7U6 833 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ATP6V0D2Q8N8Y2 350 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SMG7Q92540 1137 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ALG3Q92685 438 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SNRNP25Q9BV90 132 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TKTL2Q9H0I9 626 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PRDM12Q9H4Q4 367 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SLITRK6Q9H5Y7 841 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 DHX35Q9H5Z1 703 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 STIM2Q9P246 746 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 MRFAP1Q9Y605 127 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ZNF185O15231 689 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 FANCGO15287 622 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 DAPK3O43293 454 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 MSI1O43347 362 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 COCHO43405 550 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TJP3O95049 919 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TBX18O95935 607 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 IGLV3-25P01717 112 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 FGGP02679 453 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CKMP06732 381 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 RHOP08100 348 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PYGMP11217 842 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 MBL2P11226 248 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TCF4P15884 667 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 IGFBP4P22692 258 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 KDELR1P24390 212 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 IL1R2P27930 398 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 AVPR1AP37288 418 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 MARCKSL1P49006 195 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PGFP49763 221 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ATXN1P54253 815 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 EPHA5P54756 1037 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PITX1P78337 314 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 RING1Q06587 406 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TFDP2Q14188 446 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ATP13A4Q4VNC1 1196 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TFDP3Q5H9I0 405 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TCEAL5Q5H9L2 206 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CES5AQ6NT32 575 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TMEM184AQ6ZMB5 413 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 EP400NLQ6ZTU2 488 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 TMC8Q8IU68 726 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CCDC185Q8N715 623 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 MAB21L3Q8N8X9 362 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 CMASQ8NFW8 434 aaPredicted RBP8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 ACTRT1Q8TDG2 376 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 PLD4Q96BZ4 506 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 RPGRIP1Q96KN7 1286 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 BTN2A3PQ96KV6 586 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 HAPLN3Q96S86 360 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 EPAS1Q99814 870 aa8.86□□□□□ -0.99
SOX9-AS1-217ENST00000623935 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms