RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 BEST1O76090 585 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 P4HA1P13674 534 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 CCDC130P13994 396 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 TRIM21P19474 475 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 CASP4P49662 377 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ZNF75DP51815 510 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 NCOA4Q13772 614 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 SOWAHCQ53LP3 525 aaPredicted RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 IL27RAQ6UWB1 636 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 GLRX5Q86SX6 157 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ZMIZ2Q8NF64 920 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 SLC2A14Q8TDB8 520 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 JAKMIP2Q96AA8 810 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 LRIG1Q96JA1 1093 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 USP28Q96RU2 1077 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 SMOQ99835 787 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 KLF16Q9BXK1 252 aaPredicted RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 VRTNQ9H8Y1 702 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 TM7SF3Q9NS93 570 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 FAM49BQ9NUQ9 324 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 KBTBD4Q9NVX7 518 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 WSB2Q9NYS7 404 aaPredicted RBP8.24□□□□□ -1.09
CLK1-215ENST00000621181 MARK1Q9P0L2 795 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 RAXQ9Y2V3 346 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 STON1Q9Y6Q2 735 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 IGSF10Q6WRI0 2623 aa8.24□□□□□ -1.09
CLK1-215ENST00000621181 CYP26A1O43174 497 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CBFA2T3O75081 653 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CILPO75339 1184 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 FAM200BP0CF97 657 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 ACADMP11310 421 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CDC25BP30305 580 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 MATKP42679 507 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 TPMTP51580 245 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 SNRPFP62306 86 aaKnown RBP8.23□□□□□ -1.09
CLK1-215ENST00000621181 ORC1Q13415 861 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 SLC39A14Q15043 492 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 C10orf120Q5SQS8 335 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 DCAF12L1Q5VU92 463 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 SARM1Q6SZW1 724 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 EPM2AIP1Q7L775 607 aaPredicted RBP8.23□□□□□ -1.09
CLK1-215ENST00000621181 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CACUL1Q86Y37 369 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 TMPRSS6Q8IU80 811 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CADM4Q8NFZ8 388 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 UCMAQ8WVF2 138 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 DNASE2BQ8WZ79 361 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 SNX19Q92543 992 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 PRCCQ92733 491 aaPredicted RBP8.23□□□□□ -1.09
CLK1-215ENST00000621181 ELMO3Q96BJ8 720 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 DHX58Q96C10 678 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 SIPA1Q96FS4 1042 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CUEDC2Q9H467 287 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 IL21RQ9HBE5 538 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 CSNK1G1Q9HCP0 422 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 USP36Q9P275 1121 aaKnown RBP8.23□□□□□ -1.09
CLK1-215ENST00000621181 DNMT3LQ9UJW3 386 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 NUDT5Q9UKK9 219 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
CLK1-215ENST00000621181 UBE4BO95155 1302 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 PTPRBP23467 1997 aa8.23□□□□□ -1.09
CLK1-215ENST00000621181 GOLGA6L4A6NEF3 574 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 NPC1O15118 1278 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 MDM4O15151 490 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 FLRT2O43155 660 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 CISD3P0C7P0 127 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 ZNF883P0CG24 379 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 ACO1P21399 889 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 ADORA2BP29275 332 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 CHKAP35790 457 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 ZNF132P52740 706 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 NDST1P52848 882 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 AP3M2P53677 418 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 HLA-BQ31612 363 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 TADA2BQ86TJ2 420 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 C12orf29Q8N999 325 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 CDC6Q99741 560 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 SDCBP2Q9H190 292 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 ITM2CQ9NQX7 267 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 OSER1Q9NX31 292 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 KIAA1522Q9P206 1035 aaPredicted RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 CGNQ9P2M7 1197 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 HMGXB4Q9UGU5 601 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 EIF2B4Q9UI10 523 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 SCML2Q9UQR0 700 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 GCN1Q92616 2671 aaKnown RBP8.22□□□□□ -1.09
CLK1-215ENST00000621181 A0A1W2PQH9 124 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 METTL12A8MUP2 240 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 KCNJ18B7U540 433 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 STC2O76061 302 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 RARGP13631 454 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 OXTRP30559 389 aa8.22□□□□□ -1.09
CLK1-215ENST00000621181 IL12RB1P42701 662 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms