RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NELL2Q99435 816 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 SPHK2Q9NRA0 654 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 METTL5Q9NRN9 209 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 AGO1Q9UL18 857 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 STAP1Q9ULZ2 295 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 TLR6Q9Y2C9 796 aa20.48■□□□□ 0.87
SHKBP1-214ENST00000597396 SYNJ2BP-COX16A0A087WUM0 186 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 IRAK2O43187 625 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 ADH5P11766 374 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 TARSP26639 723 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 MATKP42679 507 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 CLCN5P51795 746 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 ZNF75DP51815 510 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 VCPP55072 806 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 PITX1P78337 314 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 GAD2Q05329 585 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 RING1Q06587 406 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 C1QBPQ07021 282 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 PTP4A2Q12974 167 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 PON2Q15165 354 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 ANO4Q32M45 955 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 HGSNATQ68CP4 663 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 RHBDF2Q6PJF5 856 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 TXNDC11Q6PKC3 985 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 MON1BQ7L1V2 547 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 PJA1Q8NG27 643 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 OR8K1Q8NGG5 319 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 ZNHIT6Q9NWK9 470 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 DDIT4Q9NX09 232 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 RRN3Q9NYV6 651 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 COX16Q9P0S2 106 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 SIT1Q9Y3P8 196 aa20.47■□□□□ 0.87
SHKBP1-214ENST00000597396 SHISA7A6NL88 538 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 FAM170BA6NMN3 283 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 DDX3XO00571 662 aaKnown RBP eCLIP20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 NCAM2O15394 837 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 IGLV3-27P01718 113 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 APOEP02649 317 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 AOC1P19801 751 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 CHKAP35790 457 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 SULT1E1P49888 294 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 TPGS1Q6ZTW0 290 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 MCOLN2Q8IZK6 566 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 OLIG1Q8TAK6 271 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 MRFAP1L1Q96HT8 127 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 SELENOOQ9BVL4 669 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 TAS2R14Q9NYV8 317 aa20.46■□□□□ 0.87
SHKBP1-214ENST00000597396 M0QYT0 321 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 MFAP3LO75121 409 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 LATS1O95835 1130 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 IGLV3-25P01717 112 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 PLEKP08567 350 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 GZMAP12544 262 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 AVPR2P30518 371 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC11A2P49281 568 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 GSCP56915 257 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 NME3Q13232 169 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 DNAJC24Q6P3W2 148 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 TMEM25Q86YD3 366 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 CNGA4Q8IV77 575 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 C3orf20Q8ND61 904 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 CD101Q93033 1021 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 RNF34Q969K3 372 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 SLC39A13Q96H72 371 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 FCRL2Q96LA5 508 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 DNAJC7Q99615 494 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 P2RY13Q9BPV8 354 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 BBS2Q9BXC9 721 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 OSBPL6Q9BZF3 934 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 TMEM59LQ9UK28 342 aa20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 MTF2Q9Y483 593 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-214ENST00000597396 WDFY4Q6ZS81 3184 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 AKR1B15C9JRZ8 316 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 RTN2O75298 545 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 MOCS2O96007 188 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 DCNP07585 359 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 KRT3P12035 628 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 HNRNPH3P31942 346 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 FLT3P36888 993 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ADKP55263 362 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 TCF15Q12870 199 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ZC3H12AQ5D1E8 599 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ARCQ7LC44 396 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 DRC7Q8IY82 874 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 CCDC105Q8IYK2 499 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 CPXM2Q8N436 756 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 EMC1Q8N766 993 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 CHFRQ96EP1 664 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 VCPIP1Q96JH7 1222 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 PHOX2BQ99453 314 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 NPY6RQ99463 290 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ABHD10Q9NUJ1 306 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ARHGAP20Q9P2F6 1191 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 ADAMTS1Q9UHI8 967 aa20.44■□□□□ 0.86
SHKBP1-214ENST00000597396 NEDD8-MDP1E9PL57 170 aa20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 TRDMT1O14717 391 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 HOXC11O43248 304 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-214ENST00000597396 PI15O43692 258 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms