RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 RFFLQ8WZ73 363 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 GOLGA1Q92805 767 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ACOX2Q99424 681 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 CBWD1Q9BRT8 395 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 B3GNT5Q9BYG0 378 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ZNF518BQ9C0D4 1074 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 LRRC27Q9C0I9 530 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 DNAI2Q9GZS0 605 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 MKRN2Q9H000 416 aaKnown RBP9.17□□□□□ -0.94
SMAD4-215ENST00000592911 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ZDHHC4Q9NPG8 344 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 SCML1Q9UN30 329 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-215ENST00000592911 PCDHA5Q9Y5H7 936 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 MGAQ8IWI9 3026 aa9.17□□□□□ -0.94
SMAD4-215ENST00000592911 AHCTF1Q8WYP5 2266 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 H3BQV1 296 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 P4HA1P13674 534 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 MAOBP27338 520 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 ACTN2P35609 894 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CTSKP43235 329 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 BCAT1P54687 386 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 MFAP3P55082 362 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 COG7P83436 770 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 GRIN1Q05586 938 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 KCNA1Q09470 495 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CAMK2GQ13555 558 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 PSMD6Q15008 389 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 BMT2Q1RMZ1 405 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 KIF19Q2TAC6 998 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 WDR72Q3MJ13 1102 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CCDC73Q6ZRK6 1079 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 UNC93AQ86WB7 457 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 OXR1Q8N573 874 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 OR5B17Q8NGF7 314 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 OR2T3Q8NH03 318 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 WFIKKN2Q8TEU8 576 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 FGF11Q92914 225 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 FCRL3Q96P31 734 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CGRRF1Q99675 332 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 MIR1-1HGQ9H1L0 117 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CCSER2Q9H7U1 834 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 IL21RQ9HBE5 538 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 TMEM30AQ9NV96 361 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 CLIC5Q9NZA1 410 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 EIF2B4Q9UI10 523 aaKnown RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 TSR3Q9UJK0 312 aaKnown RBP9.16□□□□□ -0.94
SMAD4-215ENST00000592911 DNMT3LQ9UJW3 386 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 ANKRD6Q9Y2G4 727 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 ATMQ13315 3056 aa9.16□□□□□ -0.94
SMAD4-215ENST00000592911 PTPRJQ12913 1337 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 A0A1B0GTQ1 180 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 A0A1B0GVT2 93 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 KCNJ18B7U540 433 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 VILLO15195 856 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 TSPAN3O60637 253 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 RFPL3O75679 317 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CYBBP04839 570 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 JUPP14923 745 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 IL12RB1P42701 662 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 WASP42768 502 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 COPAP53621 1224 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CACNA2D1P54289 1103 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CFHR1Q03591 330 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 TRPC3Q13507 836 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 SNRNP35Q16560 246 aaKnown RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 TTC31Q49AM3 519 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 PKDCCQ504Y2 493 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 USP30Q70CQ3 517 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 C12orf56Q8IXR9 622 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CCDC65Q8IXS2 484 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CRYBG2Q8N1P7 616 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 RBBP8NLQ8NC74 664 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 PIP4K2CQ8TBX8 421 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 SNRNP27Q8WVK2 155 aaKnown RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 PIWIL1Q96J94 861 aaKnown RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 MRPL45Q9BRJ2 306 aaKnown RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 BTBD1Q9H0C5 482 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 XYLT2Q9H1B5 865 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 ELOVL2Q9NXB9 296 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 HSPBP1Q9NZL4 362 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 GMIPQ9P107 970 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 CHORDC1Q9UHD1 332 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-215ENST00000592911 RAD54BQ9Y620 910 aa9.15□□□□□ -0.94
SMAD4-215ENST00000592911 TENM4Q6N022 2769 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 ENC1O14682 589 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 SCAMP3O14828 347 aaKnown RBP9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TRIM24O15164 1050 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 STX6O43752 255 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 AP1G2O75843 785 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 SEMA4FO95754 770 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 RALAP11233 206 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 TNNI1P19237 187 aa9.14□□□□□ -0.95
SMAD4-215ENST00000592911 NUDT1P36639 197 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms