RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 C2orf27AQ580R0 203 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 SLC47A2Q86VL8 602 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 DENND1CQ8IV53 801 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 SCUBE3Q8IX30 993 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 FAM71AQ8IYT1 594 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 WDTC1Q8N5D0 677 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 ACDQ96AP0 544 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 LSM14BQ9BX40 385 aaKnown RBP23.65■■□□□ 1.38
PABPN1-207ENST00000556821 DCLK3Q9C098 648 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 VPS16Q9H269 839 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 TJP2Q9UDY2 1190 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 AGO1Q9UL18 857 aaKnown RBP23.65■■□□□ 1.38
PABPN1-207ENST00000556821 PCDHGC3Q9UN70 934 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 ZNF510Q9Y2H8 683 aa23.65■■□□□ 1.38
PABPN1-207ENST00000556821 HBS1LQ9Y450 684 aaKnown RBP23.65■■□□□ 1.38
PABPN1-207ENST00000556821 E5RJQ4 531 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 PAPSS1O43252 624 aaPredicted RBP23.64■■□□□ 1.37
PABPN1-207ENST00000556821 KIR2DL1P43626 348 aaPredicted RBP23.64■■□□□ 1.37
PABPN1-207ENST00000556821 TYRO3Q06418 890 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 PDCLQ13371 301 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 DMC1Q14565 340 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 DRAP1Q14919 205 aaPredicted RBP23.64■■□□□ 1.37
PABPN1-207ENST00000556821 TMEM110Q86TL2 294 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 LONP2Q86WA8 852 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 FAM217AQ8IXS0 508 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 TERB1Q8NA31 727 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 HHIPQ96QV1 700 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 SEMA4GQ9NTN9 838 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 WDR35Q9P2L0 1181 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 DEC1Q9P2X7 70 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 ANGPTL2Q9UKU9 493 aa23.64■■□□□ 1.37
PABPN1-207ENST00000556821 IGLV3-27P01718 113 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 UCHL3P15374 230 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 ACADSBP45954 432 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 PXNP49023 591 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-207ENST00000556821 KLK7P49862 253 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 MRPS21P82921 87 aaKnown RBP23.63■■□□□ 1.37
PABPN1-207ENST00000556821 PTK2Q05397 1052 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 SRSF5Q13243 272 aaKnown RBP23.63■■□□□ 1.37
PABPN1-207ENST00000556821 RAPGEF1Q13905 1077 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 CSRP2Q16527 193 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 EMC10Q5UCC4 262 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 PASD1Q8IV76 773 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 CPXM2Q8N436 756 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 BHMTQ93088 406 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 PIWIL1Q96J94 861 aaKnown RBP23.63■■□□□ 1.37
PABPN1-207ENST00000556821 GANQ9H2C0 597 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 ZDHHC4Q9NPG8 344 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 DNAJC17Q9NVM6 304 aaKnown RBP23.63■■□□□ 1.37
PABPN1-207ENST00000556821 PLK2Q9NYY3 685 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 HCN2Q9UL51 889 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 SLC8A2Q9UPR5 921 aa23.63■■□□□ 1.37
PABPN1-207ENST00000556821 TM4SF5O14894 197 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 HRO43593 1189 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 PENKP01210 267 aaPredicted RBP23.62■■□□□ 1.37
PABPN1-207ENST00000556821 ZNF18P17022 549 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 COPB1P53618 953 aaKnown RBP23.62■■□□□ 1.37
PABPN1-207ENST00000556821 LPAL2Q16609 132 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 FYB2Q5VWT5 728 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 CAVIN1Q6NZI2 390 aaKnown RBP23.62■■□□□ 1.37
PABPN1-207ENST00000556821 PRR23CQ6ZRP0 262 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 WDR5BQ86VZ2 330 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 CCDC33Q8N5R6 958 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 CCDC26Q8TAB7 109 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 CPXM1Q96SM3 734 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 PLCB1Q9NQ66 1216 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 MMP17Q9ULZ9 603 aa23.62■■□□□ 1.37
PABPN1-207ENST00000556821 GDF9O60383 454 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 HNRNPLP14866 589 aaKnown RBP eCLIP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 CHKAP35790 457 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 TNFRSF4P43489 277 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 C10orf76Q5T2E6 689 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 N4BP2L1Q5TBK1 243 aaPredicted RBP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 GRAMD4Q6IC98 578 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 TOGARAM2Q6ZUX3 1019 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 APTXQ7Z2E3 356 aaKnown RBP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 CAMKK1Q8N5S9 505 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 ALLCQ8N6M5 410 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 IL17RCQ8NAC3 791 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 DQX1Q8TE96 717 aaKnown RBP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 XPO6Q96QU8 1125 aaKnown RBP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 LHX5Q9H2C1 402 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 LIMA1Q9UHB6 759 aaKnown RBP23.61■■□□□ 1.37
PABPN1-207ENST00000556821 FBXO10Q9UK96 956 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 NAALADL1Q9UQQ1 740 aa23.61■■□□□ 1.37
PABPN1-207ENST00000556821 CCDC163A0A0D9SF12 145 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 F8VZ95 297 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 GFRA2O00451 464 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 EPHB6O15197 1021 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 SART1O43290 800 aaKnown RBP23.6■■□□□ 1.37
PABPN1-207ENST00000556821 CISD3P0C7P0 127 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 TIE1P35590 1138 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 SYPL2Q5VXT5 272 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 AOPEPQ8N6M6 819 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 C1orf131Q8NDD1 294 aaKnown RBP23.6■■□□□ 1.37
PABPN1-207ENST00000556821 DDX1Q92499 740 aaKnown RBP23.6■■□□□ 1.37
PABPN1-207ENST00000556821 GOLGA1Q92805 767 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 FAM149B1Q96BN6 582 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 STOML2Q9UJZ1 356 aa23.6■■□□□ 1.37
PABPN1-207ENST00000556821 RAB23Q9ULC3 237 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms