RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 SLCO1B1Q9Y6L6 691 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 NYNRINQ9P2P1 1898 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 SLC12A8A0AV02 714 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 TSPAN3O60637 253 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 GJB3O75712 270 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 RALAP11233 206 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 PRKCHP24723 683 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 MXI1P50539 228 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 SIM1P81133 766 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 PDE4CQ08493 712 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 ENPP2Q13822 863 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 RGL4Q8IZJ4 473 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 UBA3Q8TBC4 463 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 TOE1Q96GM8 510 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 THAP10Q9P2Z0 257 aaPredicted RBP12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 SFMBT1Q9UHJ3 866 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 SLC27A6Q9Y2P4 619 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 NBEAQ8NFP9 2946 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
PRPF40B-212ENST00000551111 LAMA5O15230 3695 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 A0A1W2PQ27 194 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 A0A1W2PQ64 194 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 A0A1W2PQD8 194 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 PIK3R2O00459 728 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 SH3BP5O60239 455 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 HLA-EP13747 358 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 RPL13P26373 211 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 GTF2H1P32780 548 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 PSEN1P49768 467 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 SGSHP51688 502 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 TKTL1P51854 596 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 COPAP53621 1224 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 COG7P83436 770 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF234Q14588 700 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ANKRD40Q6AI12 368 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 PM20D1Q6GTS8 502 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 TMPRSS6Q8IU80 811 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF366Q8N895 744 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 KDF1Q8NAX2 398 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 EDEM1Q92611 657 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 GPR174Q9BXC1 333 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 PRDM16Q9HAZ2 1276 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
PRPF40B-212ENST00000551111 YJEFN3A6XGL0 299 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 E7ENQ6 273 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 GFRA2O00451 464 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 NDUFS2O75306 463 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF217O75362 1048 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ZBED1O96006 694 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 HOXD12P35452 270 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 TPMTP51580 245 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 BNC1Q01954 994 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ENPEPQ07075 957 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ADIGQ0VDE8 80 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 LRMPQ12912 555 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 PLEKHG6Q3KR16 790 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 FAM217AQ8IXS0 508 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 FMR1NBQ8N0W7 255 aaPredicted RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 CPXM2Q8N436 756 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 CHCHD4Q8N4Q1 142 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 UBR7Q8N806 425 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 CEP76Q8TAP6 659 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 TFAP2BQ92481 460 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 KAT5Q92993 513 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 CCDC47Q96A33 483 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 IL21RQ9HBE5 538 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ELOVL2Q9NXB9 296 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 COQ4Q9Y3A0 265 aa12.09□□□□□ -0.47
PRPF40B-212ENST00000551111 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms