RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 BNIP3Q12983 259 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 DTHD1Q6ZMT9 781 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 KANSL1Q7Z3B3 1105 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 GPBP1Q86WP2 473 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 HPDLQ96IR7 371 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 PIWIL1Q96J94 861 aaKnown RBP14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 VCPIP1Q96JH7 1222 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 B3GNT5Q9BYG0 378 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 STARD5Q9NSY2 213 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 ELOVL2Q9NXB9 296 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 NOL7Q9UMY1 257 aaKnown RBP14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 RELNP78509 3460 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 BSNQ9UPA5 3926 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 A0A1W2PPC4 97 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 PENKP01210 267 aaPredicted RBP14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 PTPN1P18031 435 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 CR2P20023 1033 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SLC5A3P53794 718 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 E2F1Q01094 437 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 POSTNQ15063 836 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 E2F5Q15329 346 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 PROX2Q3B8N5 592 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SERPINA13PQ6UXR4 307 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 Q6ZNB5 142 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SORCS1Q8WY21 1168 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SKA1Q96BD8 255 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SAAL1Q96ER3 474 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 KCNK16Q96T55 309 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 MRPL45Q9BRJ2 306 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 ST6GALNAC4Q9H4F1 302 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 POLR1BQ9H9Y6 1135 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 SGK2Q9HBY8 427 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 GDF3Q9NR23 364 aa14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 RBAKQ9NYW8 714 aaPredicted RBP14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 UTP20O75691 2785 aaKnown RBP14.63□□□□□ -0.07
NKX3-1-202ENST00000523261 MYF5P13349 255 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 GNL1P36915 607 aaPredicted RBP14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 ARRB1P49407 418 aaPredicted RBP14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 RPS14P62263 151 aaKnown RBP14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 SKOR1P84550 965 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 ST3GAL1Q11201 340 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 EIF4HQ15056 248 aaKnown RBP14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 ANKRD1Q15327 319 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 FYB2Q5VWT5 728 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 CDCP2Q5VXM1 449 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 KIAA0895LQ68EN5 471 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 ANKS1BQ7Z6G8 1248 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 CDK5RAP3Q96JB5 506 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 DPEP3Q9H4B8 488 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 ZHX3Q9H4I2 956 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 EBF2Q9HAK2 575 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 PDE11AQ9HCR9 933 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 THSD1Q9NS62 852 aa14.62□□□□□ -0.07
NKX3-1-202ENST00000523261 A0A1W2PR77 199 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 USP12O75317 370 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 TMEM191BP0C7N4 346 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 ITGB6P18564 788 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 CD38P28907 300 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 RXRGP48443 463 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 ZBTB16Q05516 673 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 GOLGA8FQ08AF8 430 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 GOLGA8DPQ0D2H9 430 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 SERINC3Q13530 473 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 LINC00303Q3SY05 128 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 C4orf17Q53FE4 359 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 TMEM215Q68D42 235 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 CCDC81Q6ZN84 652 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 CIPCQ9C0C6 399 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 SNX25Q9H3E2 840 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 KCNK4Q9NYG8 393 aa14.61□□□□□ -0.07
NKX3-1-202ENST00000523261 WNT9AO14904 365 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 TACC1O75410 805 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 ATP5C1P36542 298 aaKnown RBP14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 ZNF366Q8N895 744 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 B3GALNT2Q8NCR0 500 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 OR5B17Q8NGF7 314 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 OR6B3Q8NGW1 331 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 TMEM245Q9H330 911 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 CYLDQ9NQC7 956 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 AASDHPPTQ9NRN7 309 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 INTS13Q9NVM9 706 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 COMMD8Q9NX08 183 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 CLEC4EQ9ULY5 219 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 R3HCC1Q9Y3T6 440 aaKnown RBP14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 ABCA12Q86UK0 2595 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 NBASA2RRP1 2371 aa14.6□□□□□ -0.07
NKX3-1-202ENST00000523261 DOPEY1Q5JWR5 2465 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 CLEC18AA5D8T8 446 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 TBCAO75347 108 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 PPP1R37O75864 691 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 LDHAP00338 332 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 DNTTP04053 509 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 NXPH1P58417 271 aa14.59□□□□□ -0.07
NKX3-1-202ENST00000523261 KCNA1Q09470 495 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms