RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 PSTPIP1O43586 416 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 MOSPD3O75425 235 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 FGF19O95750 216 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 TBX18O95935 607 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 F9P00740 461 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 RHOP08100 348 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 IL1R2P27930 398 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 CASQ1P31415 396 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 CCR2P41597 374 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 MARCKSL1P49006 195 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 PEX5P50542 639 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 NNTQ13423 1086 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 ADAM15Q13444 863 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 COL19A1Q14993 1142 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 RPS6KA1Q15418 735 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 PAPD7Q5XG87 772 aaKnown RBP13.87□□□□□ -0.19
PRDM2-213ENST00000503842 ANKRD54Q6NXT1 300 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 SYCE2Q6PIF2 218 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 CYP4V2Q6ZWL3 525 aaPredicted RBP13.87□□□□□ -0.19
PRDM2-213ENST00000503842 RSRC2Q7L4I2 434 aaKnown RBP13.87□□□□□ -0.19
PRDM2-213ENST00000503842 POLNQ7Z5Q5 900 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 RHOT1Q8IXI2 618 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 SHKBP1Q8TBC3 707 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 ADAM32Q8TC27 787 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 SMG7Q92540 1137 aaKnown RBP13.87□□□□□ -0.19
PRDM2-213ENST00000503842 PIGVQ9NUD9 493 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 DDIT4Q9NX09 232 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 SFMBT1Q9UHJ3 866 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 USP18Q9UMW8 372 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 PCDHA3Q9Y5H8 950 aa13.87□□□□□ -0.19
PRDM2-213ENST00000503842 CCDC66A2RUB6 948 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 C2orf78A6NCI8 922 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 COCHO43405 550 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 OLFM2O95897 454 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 MYL4P12829 197 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 GBP1P32455 592 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SSR1P43307 286 aaKnown RBP13.86□□□□□ -0.19
PRDM2-213ENST00000503842 CXCR3P49682 368 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 NTHL1P78549 312 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 AMPD2Q01433 879 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 HADHQ16836 314 aaKnown RBP13.86□□□□□ -0.19
PRDM2-213ENST00000503842 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 PRSS36Q5K4E3 855 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 TXNRD3NBQ6F5E7 133 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 TMC5Q6UXY8 1006 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
PRDM2-213ENST00000503842 ALG3Q92685 438 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 TCEAL4Q96EI5 215 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SLC39A13Q96H72 371 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 GCNAQ96QF7 691 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 MARCH2Q9P0N8 246 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
PRDM2-213ENST00000503842 SYNJ2BP-COX16A0A087WUM0 186 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 MSI1O43347 362 aaKnown RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 PRPSAP2O60256 369 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 IGLV3-27P01718 113 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 KRT7P08729 469 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 HOXB8P17481 243 aaPredicted RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 PFKLP17858 780 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 ATP5C1P36542 298 aaKnown RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 CYP4F8P98187 520 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 NME3Q13232 169 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 TRIP4Q15650 581 aaPredicted RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 SLC5A9Q2M3M2 681 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 BOLA3Q53S33 107 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 TXNDC8Q6A555 127 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 SCYL2Q6P3W7 929 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 PDZD4Q76G19 769 aaPredicted RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 GRASPQ7Z6J2 395 aaPredicted RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 GPR149Q86SP6 731 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 FAM131BQ86XD5 332 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 CCDC185Q8N715 623 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 UBL4BQ8N7F7 174 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 KIF18AQ8NI77 898 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 TEKT4Q8WW24 435 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 NTAN1Q96AB6 310 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 REPIN1Q9BWE0 567 aaKnown RBP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 PRR14Q9BWN1 585 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 RNF38Q9H0F5 515 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 ATXN3LQ9H3M9 355 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRDM2-213ENST00000503842 COX16Q9P0S2 106 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 CLEC1BQ9P126 229 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 RASAL2Q9UJF2 1139 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 DNMT3LQ9UJW3 386 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 TLR6Q9Y2C9 796 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 C2orf16Q68DN1 1984 aa13.85□□□□□ -0.19
PRDM2-213ENST00000503842 BRWD1Q9NSI6 2320 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms