RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MORF4L2Q15014 288 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 FSCBQ5H9T9 825 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 RARS2Q5T160 578 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 CES3Q6UWW8 571 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ZNF572Q7Z3I7 529 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 RIBC1Q8N443 379 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ARRDC4Q8NCT1 418 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 SCG3Q8WXD2 468 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 FAM136AQ96C01 138 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ADA2Q9NZK5 511 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 MID2Q9UJV3 735 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 R3HDM2Q9Y2K5 976 aaKnown RBP11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.54
SMPD4-218ENST00000482171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 DNALI1O14645 258 aaPredicted RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 BANF1O75531 89 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 POLBP06746 335 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 OCRLQ01968 901 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 ASTE1Q2TB18 679 aaPredicted RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 C16orf87Q6PH81 154 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 TAS2R42Q7RTR8 314 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 PHF13Q86YI8 300 aaPredicted RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 TTC8Q8TAM2 541 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 TFAP2BQ92481 460 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 NDRG1Q92597 394 aaKnown RBP11.65□□□□□ -0.55
SMPD4-218ENST00000482171 PAFAH2Q99487 392 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 APBA2Q99767 749 aa11.65□□□□□ -0.55
SMPD4-218ENST00000482171 TJP1Q07157 1748 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 KPNA6O60684 536 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MYL2P10916 166 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 CHRNB2P17787 502 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MMP8P22894 467 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 RECQLP46063 649 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 STX1BP61266 288 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 STX3Q13277 289 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SNX17Q15036 470 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 RNF219Q5W0B1 726 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ATXN3LQ9H3M9 355 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 PDZD7Q9H5P4 517 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 CATSPERBQ9H7T0 1116 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SLC39A10Q9ULF5 831 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 NEMP1O14524 444 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 UNC5CO95185 931 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ALDH1A1P00352 501 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TPH1P17752 444 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 AXLP30530 894 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SH3D19Q5HYK7 790 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ISLR2Q6UXK2 745 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 LRRC57Q8N9N7 239 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MUC3BQ9H195 1237 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 PIDD1Q9HB75 910 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 LZTS1Q9Y250 596 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ATXN2Q99700 1313 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SLC12A8A0AV02 714 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 B4GALT4O60513 344 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 LGR5O75473 907 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 S100BP04271 92 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 BRCC3P46736 316 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MRPS6P82932 125 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SP3Q02447 781 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TWF1Q12792 350 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TSHZ1Q6ZSZ6 1077 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 NT5DC4Q86YG4 428 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TBC1D10AQ9BXI6 508 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MAGEB5Q9BZ81 275 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 PPCSQ9HAB8 311 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 NOCTQ9UK39 431 aaKnown RBP11.64□□□□□ -0.55
SMPD4-218ENST00000482171 MYH8P13535 1937 aa11.64□□□□□ -0.55
SMPD4-218ENST00000482171 TBKBP1A7MCY6 615 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 RGS20O76081 388 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 TGM2P21980 687 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SDHAF4Q5VUM1 108 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ARHGAP22Q7Z5H3 698 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ANKRD23Q86SG2 305 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ELMOD1Q8N336 334 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 PPHLN1Q8NEY8 458 aaKnown RBP11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CDC26Q8NHZ8 85 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ASIC4Q96FT7 647 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CCDC138Q96M89 665 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 SMIM28A0A1B0GU29 152 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 ALDH2P05091 517 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 CFHP08603 1231 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 GRM5P41594 1212 aa11.63□□□□□ -0.55
SMPD4-218ENST00000482171 GSCP56915 257 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms