RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 P3H4Q92791 437 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 TIFAQ96CG3 184 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 SAAL1Q96ER3 474 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 TSPAN18Q96SJ8 248 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 TRIM5Q9C035 493 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 IQCGQ9H095 443 aaKnown RBP4.43□□□□□ -1.7
CMSS1-204ENST00000479555 VIPAS39Q9H9C1 493 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 DDX21Q9NR30 783 aaKnown RBP eCLIP4.43□□□□□ -1.7
CMSS1-204ENST00000479555 RLIMQ9NVW2 624 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 CFAP97Q9P2B7 532 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 GGA2Q9UJY4 613 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 ZNF215Q9UL58 517 aaPredicted RBP4.43□□□□□ -1.7
CMSS1-204ENST00000479555 ZDHHC8Q9ULC8 765 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 L1RE1Q9UN81 338 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 PTPRKQ15262 1439 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 DENND4BO75064 1496 aaPredicted RBP4.43□□□□□ -1.7
CMSS1-204ENST00000479555 PLA2R1Q13018 1463 aa4.43□□□□□ -1.7
CMSS1-204ENST00000479555 DNMT1P26358 1616 aaKnown RBP4.43□□□□□ -1.7
CMSS1-204ENST00000479555 RTL1A6NKG5 1358 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PRDM15P57071 1507 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ASXL1Q8IXJ9 1541 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ANO9A1A5B4 782 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 QSOX1O00391 747 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PHGDHO43175 533 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 KINO60870 393 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ANXA1P04083 346 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PIK3CGP48736 1102 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ZNF134P52741 427 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 EEFSECP57772 596 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 G3BP1Q13283 466 aaKnown RBP eCLIP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PICALMQ13492 652 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CUL4AQ13619 759 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC57Q2TAC2 916 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ALDH1L2Q3SY69 923 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 TREML2Q5T2D2 321 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ERCC6L2Q5T890 1561 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RNF220Q5VTB9 566 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 SKAP1Q86WV1 359 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PLA2G4DQ86XP0 818 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 LRRC8AQ8IWT6 810 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 DRAXINQ8NBI3 349 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PJA1Q8NG27 643 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 TDRD7Q8NHU6 1098 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CCDC26Q8TAB7 109 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CYP2W1Q8TAV3 490 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ATRIPQ8WXE1 791 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RUBCNQ92622 972 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 GOLGA1Q92805 767 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 GTF3C6Q969F1 213 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 SMARCE1Q969G3 411 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 TINAGL1Q9GZM7 467 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PRSS22Q9GZN4 317 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 SIK2Q9H0K1 926 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ARMT1Q9H993 441 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ACTR5Q9H9F9 607 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 PIH1D1Q9NWS0 290 aaKnown RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 KLHL13Q9P2N7 655 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ORC3Q9UBD5 711 aaPredicted RBP4.42□□□□□ -1.7
CMSS1-204ENST00000479555 ODF2LQ9ULJ1 636 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 TPCN1Q9ULQ1 816 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RIMBP3CA6NJZ7 1639 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RIMBP3BA6NNM3 1639 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 RIMBP3Q9UFD9 1639 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 CNTNAP2Q9UHC6 1331 aa4.42□□□□□ -1.7
CMSS1-204ENST00000479555 DAPK1P53355 1430 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 SRRM3A6NNA2 597 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PDLIM1O00151 329 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 FRS3O43559 492 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 BCAR3O75815 825 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 NXPH3O95157 252 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 GNAI2P04899 355 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 IL6RP08887 468 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 SKILP12757 684 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 RPL17P18621 184 aaKnown RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 GPTP24298 496 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PRDX5P30044 214 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PPP2R1AP30153 589 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 CCKBRP32239 447 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ABCD1P33897 745 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 GCLCP48506 637 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ZNF75DP51815 510 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 AKAP17AQ02040 695 aaKnown RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 DYNC1I2Q13409 638 aaKnown RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PDIA5Q14554 519 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 POLD3Q15054 466 aaPredicted RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 KHDC1LQ5JSQ8 128 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 AARS2Q5JTZ9 985 aaKnown RBP4.41□□□□□ -1.7
CMSS1-204ENST00000479555 GORABQ5T7V8 394 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 WLSQ5T9L3 541 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 TMEM108Q6UXF1 575 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 CATSPERGQ6ZRH7 1159 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 ARMC9Q7Z3E5 817 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 IQCA1Q86XH1 822 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 PDSS2Q86YH6 399 aa4.41□□□□□ -1.7
CMSS1-204ENST00000479555 CCAR2Q8N163 923 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms