RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TMC7Q7Z402 723 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 MAML3Q96JK9 1138 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 FICDQ9BVA6 458 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 TKTL2Q9H0I9 626 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 FAM105AQ9NUU6 356 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
BRAT1-203ENST00000467558 MYH2Q9UKX2 1941 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 PPFIA2O75334 1257 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 JAM2P57087 298 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ABCE1P61221 599 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ANGPTL8Q6UXH0 198 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 APTXQ7Z2E3 356 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 DAW1Q8N136 415 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 NCLNQ969V3 563 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 PPP1R36Q96LQ0 422 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ILKAPQ9H0C8 392 aaPredicted RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 NXF3Q9H4D5 531 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 NUP188Q5SRE5 1749 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 TMEM191CA6NGB0 347 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 LIASO43766 372 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 MAP4P27816 1152 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 CDK16Q00536 496 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 LBRQ14739 615 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 NBPF20Q3BBV1 942 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 AARS2Q5JTZ9 985 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ITIH5Q86UX2 942 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 MREGQ8N565 214 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 SLC26A7Q8TE54 656 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 RNF157Q96PX1 679 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 IARS2Q9NSE4 1012 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 TRUB2O95900 331 aaKnown RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 CST3P01034 146 aaPredicted RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ESRRGP62508 458 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
BRAT1-203ENST00000467558 MFN1Q8IWA4 741 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 FOPNLQ96NB1 174 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 DOT1LQ8TEK3 1739 aa14.19□□□□□ -0.14
BRAT1-203ENST00000467558 ANGPT2O15123 496 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SERPINF2P08697 491 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 DNAJB2P25686 324 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 RGS9BPQ6ZS82 235 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 TOP6BLQ8N6T0 577 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SH3KBP1Q96B97 665 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SHISA4Q96DD7 197 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CCDC126Q96EE4 140 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SNRNP25Q9BV90 132 aaKnown RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CEP41Q9BYV8 373 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 WRAP73Q9P2S5 460 aaPredicted RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 THEGQ9P2T0 379 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CRLS1Q9UJA2 301 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 VPS28Q9UK41 221 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 ACOT9Q9Y305 439 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 PCDHA2Q9Y5H9 948 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 PTCH2Q9Y6C5 1203 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 TMEM247A6NEH6 219 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 TRIM66O15016 1216 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 ZBTB22O15209 634 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 DHX15O43143 795 aaKnown RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CD52P31358 61 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 ITIH4Q14624 930 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SLC45A4Q5BKX6 768 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SETD3Q86TU7 594 aaPredicted RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 HERC6Q8IVU3 1022 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 C12orf29Q8N999 325 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 DDI1Q8WTU0 396 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SGF29Q96ES7 293 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CD274Q9NZQ7 290 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SAE1Q9UBE0 346 aaPredicted RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CDYLQ9Y232 598 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 ZNF536O15090 1300 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SUPT3HB4E1H0 165 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 SUPT3HO75486 399 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CRTAMO95727 393 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 ZSCAN5DPP0CG00 497 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 GTF2H3Q13889 308 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 DUPD1Q68J44 220 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 KCNK16Q96T55 309 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 MRPL1Q9BYD6 325 aaKnown RBP14.18□□□□□ -0.14
BRAT1-203ENST00000467558 TMEM39AQ9NV64 488 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 B2RBV5 119 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 FECHP22830 423 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 GP5P40197 560 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 NPY2RP49146 381 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 OVGP1Q12889 678 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 PLEKHA7Q6IQ23 1121 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 UGT3A1Q6NUS8 523 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 TFAP2DQ7Z6R9 452 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 OR12D3Q9UGF7 316 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 COQ4Q9Y3A0 265 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 IPPQ9Y573 584 aa14.18□□□□□ -0.14
BRAT1-203ENST00000467558 CNTNAP1P78357 1384 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 SOAT2O75908 522 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ASMTLO95671 621 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ESRRBO95718 433 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 ITGAVP06756 1048 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 OR1E1P30953 314 aa14.17□□□□□ -0.14
BRAT1-203ENST00000467558 SYTL3Q4VX76 610 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms