RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 HTR3DQ70Z44 454 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 H2AFVQ71UI9 128 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 BHLHA9Q7RTU4 235 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 RALGPS2Q86X27 583 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 DENND1CQ8IV53 801 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 TC2NQ8N9U0 490 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 EDAQ92838 391 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 BTN2A3PQ96KV6 586 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 MCEEQ96PE7 176 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 XPO6Q96QU8 1125 aaKnown RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 NELL2Q99435 816 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 BAG1Q99933 345 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 SYT11Q9BT88 431 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 IRX2Q9BZI1 471 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-206ENST00000462613 PLA2G2FQ9BZM2 168 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 ISCUQ9H1K1 167 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 EBF3Q9H4W6 596 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 WDCPQ9H6R7 721 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 ARHGEF3Q9NR81 526 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 OSER1Q9NX31 292 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 COX16Q9P0S2 106 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 TJP2Q9UDY2 1190 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 WNT6Q9Y6F9 365 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 PIAS3Q9Y6X2 628 aa6.64□□□□□ -1.35
SF3B1-206ENST00000462613 FAM170AA1A519 330 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 F5H5T6 163 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 MYO1FO00160 1098 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 MSI1O43347 362 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 GABBR2O75899 941 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 MOCS2O96007 188 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 COL4A2P08572 1712 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 F5P12259 2224 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 RRM1P23921 792 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PSMA2P25787 234 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 RDXP35241 583 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PTPN9P43378 593 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PGFP49763 221 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 AIF1P55008 147 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 KRT83P78385 493 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ATP11AP98196 1134 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PIGHQ14442 188 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 GSE1Q14687 1217 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PPP2R5DQ14738 602 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ACAP1Q15027 740 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 EML3Q32P44 896 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 MPPE1Q53F39 396 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 SLC44A4Q53GD3 710 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 RABGAP1LQ5R372 815 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ADGRF1Q5T601 910 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 TTC39BQ5VTQ0 682 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 SYPL2Q5VXT5 272 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 WDR59Q6PJI9 974 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 LRRC31Q6UY01 552 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ZNF852Q6ZMS4 543 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 TPRG1Q6ZUI0 275 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 STRADAQ7RTN6 431 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 KIAA1328Q86T90 577 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 TAC4Q86UU9 113 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CHSY1Q86X52 802 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 BBS7Q8IWZ6 715 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 SUGP1Q8IWZ8 645 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 RHOT2Q8IXI1 618 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CPXM2Q8N436 756 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 EMC1Q8N766 993 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ST13P5Q8NFI4 369 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ADAM32Q8TC27 787 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 FNIP1Q8TF40 1166 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 DDI1Q8WTU0 396 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 RXFP2Q8WXD0 754 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 AZIN2Q96A70 460 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PGAP3Q96FM1 320 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PIWIL1Q96J94 861 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ZFYVE19Q96K21 471 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ZFRQ96KR1 1074 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 PPP1R9BQ96SB3 815 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 NPY6RQ99463 290 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 FAM83CQ9BQN1 747 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CNPY3Q9BT09 278 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 DDX23Q9BUQ8 820 aaKnown RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 BBS2Q9BXC9 721 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 C1QTNF1Q9BXJ1 281 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 COL25A1Q9BXS0 654 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-206ENST00000462613 ECT2Q9H8V3 914 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CD320Q9NPF0 282 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 SPHK2Q9NRA0 654 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CTTNBP2NLQ9P2B4 639 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 UVRAGQ9P2Y5 699 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 IP6K2Q9UHH9 426 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 TMEM59LQ9UK28 342 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 INTUQ9ULD6 942 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 CA14Q9ULX7 337 aa6.63□□□□□ -1.35
SF3B1-206ENST00000462613 C2CD4BA6NLJ0 364 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 KCNU1A8MYU2 1149 aa6.62□□□□□ -1.35
SF3B1-206ENST00000462613 SPECC1L-ADORA2AF8WAN1 911 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms