RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 LMO2P25791 158 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 MIPP30301 263 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 CDH5P33151 784 aaPredicted RBP7.52□□□□□ -1.21
LSM8-204ENST00000424702 CARSP49589 748 aaKnown RBP7.52□□□□□ -1.21
LSM8-204ENST00000424702 MRPS5P82675 430 aaKnown RBP7.52□□□□□ -1.21
LSM8-204ENST00000424702 CAV1Q03135 178 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 SLMAPQ14BN4 828 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 OSTM1Q86WC4 334 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 TDRD5Q8NAT2 981 aaKnown RBP7.52□□□□□ -1.21
LSM8-204ENST00000424702 JOSD2Q8TAC2 188 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 SPATA17Q96L03 361 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 GDF15Q99988 308 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 C17orf80Q9BSJ5 609 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 WDCPQ9H6R7 721 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 CXXC1Q9P0U4 656 aaPredicted RBP7.52□□□□□ -1.21
LSM8-204ENST00000424702 CD207Q9UJ71 328 aa7.52□□□□□ -1.21
LSM8-204ENST00000424702 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 TEX28O15482 410 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CREB3O43889 395 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 NFATC1O95644 943 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 ITGB1P05556 798 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 IVLP07476 585 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 HMBSP08397 361 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 OAS2P29728 719 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 HTR7P34969 479 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SLC5A3P53794 718 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TAS2R40P59535 323 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 MCCD1P59942 119 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 ZNF177Q13360 481 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 BYSLQ13895 437 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 PDK2Q15119 407 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 ANO4Q32M45 955 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 C9orf50Q5SZB4 431 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 ALS2CLQ60I27 953 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 AADACL2Q6P093 401 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 MIB1Q86YT6 1006 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CDKL3Q8IVW4 592 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 GDPD5Q8WTR4 605 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 PLD4Q96BZ4 506 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 B3GNT5Q9BYG0 378 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 RXFP1Q9HBX9 757 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 MRPS17Q9Y2R5 130 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 IKBKGQ9Y6K9 419 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SMIM23A6NLE4 172 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 MEIS3P2A8K0S8 358 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 CLDN5O00501 218 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 PPP1R12AO14974 1030 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 MTSS1O43312 755 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TLR5O60602 858 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 ADH1CP00326 375 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 RARAP10276 462 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 RPL17P18621 184 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 CYP2F1P24903 491 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 HOXA9P31269 272 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 EIF3EP60228 445 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 TAF10Q12962 218 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CCNG2Q16589 344 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 KRT71Q3SY84 523 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CEP85LQ5SZL2 805 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TMCO4Q5TGY1 634 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SLC8B1Q6J4K2 584 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 PMF1Q6P1K2 205 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 MFSD7Q6UXD7 560 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 GET4Q7L5D6 327 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 POLNQ7Z5Q5 900 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 UBR7Q8N806 425 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SPPL3Q8TCT6 385 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CLP1Q92989 425 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 SNF8Q96H20 258 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CLIC5Q9NZA1 410 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 EEF2KO00418 725 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 AARSP49588 968 aaKnown RBP eCLIP7.51□□□□□ -1.214e-6■■■□□ 17.5
LSM8-204ENST00000424702 NNTQ13423 1086 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CDH18Q13634 790 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SEPT7Q16181 437 aaKnown RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 DDR2Q16832 855 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 DAB2IPQ5VWQ8 1189 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 LEKR1Q6ZMV7 388 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SLC26A9Q7LBE3 791 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 DEFB106AQ8N104 65 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TMEM130Q8N3G9 435 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TAB3Q8N5C8 712 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 ARFGAP2Q8N6H7 521 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 HJURPQ8NCD3 748 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 CCNYQ8ND76 341 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SP7Q8TDD2 431 aaPredicted RBP7.51□□□□□ -1.21
LSM8-204ENST00000424702 ATG4AQ8WYN0 398 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SIK2Q9H0K1 926 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 TASP1Q9H6P5 420 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CWH43Q9H720 699 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 SP110Q9HB58 689 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 CACNG4Q9UBN1 327 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 FBXL21Q9UKT6 434 aa7.51□□□□□ -1.21
LSM8-204ENST00000424702 ATP2C2O75185 946 aa7.5□□□□□ -1.21
LSM8-204ENST00000424702 BASP1P80723 227 aaKnown RBP7.5□□□□□ -1.21
LSM8-204ENST00000424702 PTP4A2Q12974 167 aa7.5□□□□□ -1.21
LSM8-204ENST00000424702 RTP2Q5QGT7 225 aa7.5□□□□□ -1.21
LSM8-204ENST00000424702 DNAJB7Q7Z6W7 309 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms