RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 BCCIPQ9P287 314 aaKnown RBP eCLIP19.31■□□□□ 0.68
NUP50-207ENST00000424634 CEP192Q8TEP8 1941 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 WASH3PC4AMC7 463 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 M0QYV0 167 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 CAVIN2O95810 425 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 HOXB2P14652 356 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 MFAP3P55082 362 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 GEN1Q17RS7 908 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 KIAA1211LQ6NV74 962 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 C11orf74Q86VG3 221 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 CHPFQ8IZ52 775 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 PGBD3Q8N328 593 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 CPXM2Q8N436 756 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 C12orf50Q8NA57 414 aaPredicted RBP19.3■□□□□ 0.68
NUP50-207ENST00000424634 CLEC4CQ8WTT0 213 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 PLD4Q96BZ4 506 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 GABRG3Q99928 467 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 UBE2TQ9NPD8 197 aaPredicted RBP19.3■□□□□ 0.68
NUP50-207ENST00000424634 ABCC13Q9NSE7 274 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 OLA1Q9NTK5 396 aaKnown RBP19.3■□□□□ 0.68
NUP50-207ENST00000424634 SLC27A6Q9Y2P4 619 aa19.3■□□□□ 0.68
NUP50-207ENST00000424634 TM4SF5O14894 197 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 FGFR1OPO95684 399 aaKnown RBP19.29■□□□□ 0.68
NUP50-207ENST00000424634 STILQ15468 1287 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 IPO4Q8TEX9 1081 aaKnown RBP19.29■□□□□ 0.68
NUP50-207ENST00000424634 RNF139Q8WU17 664 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 PIWIL1Q96J94 861 aaKnown RBP19.29■□□□□ 0.68
NUP50-207ENST00000424634 CRACR2AQ9BSW2 395 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 CACNA2D2Q9NY47 1150 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 HBS1LQ9Y450 684 aaKnown RBP19.29■□□□□ 0.68
NUP50-207ENST00000424634 RAD54BQ9Y620 910 aa19.29■□□□□ 0.68
NUP50-207ENST00000424634 TNRC6BQ9UPQ9 1833 aaKnown RBP19.29■□□□□ 0.68
NUP50-207ENST00000424634 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 GFRA2O00451 464 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 MSI1O43347 362 aaKnown RBP19.28■□□□□ 0.68
NUP50-207ENST00000424634 GPD2P43304 727 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 RPL34P49207 117 aaKnown RBP19.28■□□□□ 0.68
NUP50-207ENST00000424634 LIMK1P53667 647 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 APBA1Q02410 837 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 MSANTD2Q6P1R3 559 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 GJB7Q6PEY0 223 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 TMEFF1Q8IYR6 380 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 IRGQQ8WZA9 623 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 HSFY1Q96LI6 401 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 ACP6Q9NPH0 428 aa19.28■□□□□ 0.68
NUP50-207ENST00000424634 PI4KAP42356 2102 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 TSPAN3O60637 253 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 FYNP06241 537 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 KRT5P13647 590 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 SLC9A1P19634 815 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 DHPSP49366 369 aaPredicted RBP19.27■□□□□ 0.68
NUP50-207ENST00000424634 HARS2P49590 506 aaKnown RBP19.27■□□□□ 0.68
NUP50-207ENST00000424634 STPG1Q5TH74 334 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 SDE2Q6IQ49 451 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 DENND1BQ6P3S1 775 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 SCUBE3Q8IX30 993 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 DDI1Q8WTU0 396 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 MIS12Q9H081 205 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 SLC6A17Q9H1V8 727 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 CALCOCO1Q9P1Z2 691 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 STOML2Q9UJZ1 356 aa19.27■□□□□ 0.68
NUP50-207ENST00000424634 PATE3B3GLJ2 98 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 MAP3K13O43283 966 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 LTFP02788 710 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 CYBBP04839 570 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 NDUFV2P19404 249 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 PTGER3P43115 390 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 TMEM215Q68D42 235 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 TRIM65Q6PJ69 517 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 LPCAT2Q7L5N7 544 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 MLKLQ8NB16 471 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 ZNF606Q8WXB4 792 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 SPACA7Q96KW9 195 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 CLSTN2Q9H4D0 955 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 TMEM74BQ9NUR3 256 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 THAP10Q9P2Z0 257 aaPredicted RBP19.26■□□□□ 0.67
NUP50-207ENST00000424634 CYTH4Q9UIA0 394 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 STON1Q9Y6Q2 735 aa19.26■□□□□ 0.67
NUP50-207ENST00000424634 BECN2A8MW95 431 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 IGLV3-27P01718 113 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 HOXD9P28356 352 aaPredicted RBP19.25■□□□□ 0.67
NUP50-207ENST00000424634 SGSHP51688 502 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 ENPP2Q13822 863 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 BYSLQ13895 437 aaKnown RBP19.25■□□□□ 0.67
NUP50-207ENST00000424634 MPPE1Q53F39 396 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 ADGRF1Q5T601 910 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 ARMCX6Q7L4S7 300 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 CYP2U1Q7Z449 544 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 SORCS1Q8WY21 1168 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 PIGKQ92643 395 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 SLC2A11Q9BYW1 496 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 CD93Q9NPY3 652 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 ELOVL2Q9NXB9 296 aa19.25■□□□□ 0.67
NUP50-207ENST00000424634 GOLGA6L7A0A1B0GV03 622 aa19.24■□□□□ 0.67
NUP50-207ENST00000424634 LNP1A1A4G5 178 aa19.24■□□□□ 0.67
NUP50-207ENST00000424634 FBXO21O94952 628 aa19.24■□□□□ 0.67
NUP50-207ENST00000424634 LETM1O95202 739 aaPredicted RBP19.24■□□□□ 0.67
NUP50-207ENST00000424634 IL12RB1P42701 662 aa19.24■□□□□ 0.67
NUP50-207ENST00000424634 IRX4P78413 519 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms