RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 TMX3Q96JJ7 454 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 UIMC1Q96RL1 719 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 SDF4Q9BRK5 362 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 LLPHQ9BRT6 129 aaKnown RBP5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 C16orf70Q9BSU1 422 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 KATNAL1Q9BW62 490 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 PITHD1Q9GZP4 211 aaPredicted RBP5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 MS4A5Q9H3V2 200 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 POFUT1Q9H488 388 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 CXorf56Q9H5V9 222 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 AGO4Q9HCK5 861 aaKnown RBP5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 PCDH12Q9NPG4 1184 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 HDAC6Q9UBN7 1215 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 SLC9A2Q9UBY0 812 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 MAGEL2Q9UJ55 1249 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 MSRAQ9UJ68 235 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 COL4A3BPQ9Y5P4 624 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 TTC3P53804 2025 aa5.34□□□□□ -1.55
ATG4AP1-201ENST00000416893 UMODL1Q5DID0 1318 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 EMSYQ7Z589 1322 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 GSTTP1A0A1W2PQM5 241 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 DDX39AO00148 427 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 IPO5O00410 1097 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MSH4O15457 936 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 NARSO43776 548 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SLC37A4O43826 429 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CCNE2O96020 404 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 TIMP1P01033 207 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MMP1P03956 469 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 TPM3P06753 285 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SETSIPP0DME0 302 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CYP2C9P11712 490 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 HOXC8P31273 242 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CASQ1P31415 396 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CYP2C18P33260 490 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 KRT2P35908 639 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 TCF7P36402 384 aaPredicted RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MCM2P49736 904 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 BPIFB4P59827 614 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 ACTR2P61160 394 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SARNPP82979 210 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 TMPRSS15P98073 1019 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 GUCY1B3Q02153 619 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 TRIM29Q14134 588 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 PTPROQ16827 1216 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 LSM12Q3MHD2 195 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 Q4G0T1 1027 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 EARS2Q5JPH6 523 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 KRT40Q6A162 431 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MOXD1Q6UVY6 613 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 PIK3AP1Q6ZUJ8 805 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 NEK8Q86SG6 692 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SESTD1Q86VW0 696 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SPATS2Q86XZ4 545 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 DIS3L2Q8IYB7 885 aaKnown RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 ANKRD53Q8N9V6 530 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 ATL2Q8NHH9 583 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SEPT1Q8WYJ6 367 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 BADQ92934 168 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 C8orf76Q96K31 380 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 HIST1H2AHQ96KK5 128 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MBOAT7Q96N66 472 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 PCYT2Q99447 389 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 HIST1H2AJQ99878 128 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 LBHD1Q9BQE6 289 aaPredicted RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 ZNF577Q9BSK1 485 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 HAPLN2Q9GZV7 340 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 HIPK3Q9H422 1215 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 AURKAIP1Q9NWT8 199 aaPredicted RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 RSPH14Q9UHP6 348 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 ZNF215Q9UL58 517 aaPredicted RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SUFUQ9UMX1 484 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 MORC2Q9Y6X9 1032 aaPredicted RBP5.33□□□□□ -1.56
ATG4AP1-201ENST00000416893 CYP3A7-CYP3A51PA0A087WV96 503 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 A0A0A6YYJ9 748 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 C17orf102A2RUQ5 167 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 LCHNA4D1U4 455 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 BTBD18B2RXH4 712 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 H0YHG0 523 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 KDM1AO60341 852 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 OPHN1O60890 802 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 FSBPO95073 299 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 ZRANB2O95218 330 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 SUPT20HL2P0C7V6 817 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 SMIM10L2AP0DMW4 78 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 SMIM10L2BP0DMW5 78 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 GCFC2P16383 781 aaKnown RBP5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 CYP3A7P24462 503 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 MARK3P27448 753 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 MCM7P33993 719 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 CCL23P55773 120 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 IRX1P78414 480 aaPredicted RBP5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 DGCR2P98153 550 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 FPGSQ05932 587 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 FAPQ12884 760 aa5.32□□□□□ -1.56
ATG4AP1-201ENST00000416893 PPFIA1Q13136 1202 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms