RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GPR161Q8N6U8 529 aaKnown RBP11.69□□□□□ -0.54
RFFL-204ENST00000414419 IL17RCQ8NAC3 791 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 GAB3Q8WWW8 586 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 SERPINB11Q96P15 392 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 SLC4A5Q9BY07 1137 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 EBF1Q9UH73 591 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
RFFL-204ENST00000414419 THADAQ6YHU6 1953 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 TRIM24O15164 1050 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 LATS1O95835 1130 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 UCHL3P15374 230 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 HOXC13P31276 330 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 CLCN1P35523 988 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 KIR2DL1P43626 348 aaPredicted RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 SLC11A2P49281 568 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 TBX4P57082 545 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 YWHAZP63104 245 aaKnown RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PDCLQ13371 301 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 MPPE1Q53F39 396 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 USP39Q53GS9 565 aaKnown RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 ADGRF1Q5T601 910 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 CDKAL1Q5VV42 579 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 ANO7Q6IWH7 933 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 CACNA2D4Q7Z3S7 1137 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 SLC47A2Q86VL8 602 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PASD1Q8IV76 773 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 SFTPA1Q8IWL2 248 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 KIAA2013Q8IYS2 634 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 CHPFQ8IZ52 775 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 IPO4Q8TEX9 1081 aaKnown RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 UCMAQ8WVF2 138 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 PCMTD1Q96MG8 357 aaPredicted RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 DDX50Q9BQ39 737 aaKnown RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 LHX5Q9H2C1 402 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 POPDC2Q9HBU9 364 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 BCCIPQ9P287 314 aaKnown RBP eCLIP11.68□□□□□ -0.54
RFFL-204ENST00000414419 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
RFFL-204ENST00000414419 FHOD1Q9Y613 1164 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 GVINP1Q7Z2Y8 2422 aa11.68□□□□□ -0.54
RFFL-204ENST00000414419 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 ANTXRLA6NF34 631 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 SGK1O00141 431 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
RFFL-204ENST00000414419 TSPAN3O60637 253 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 PNMA6AP0CW24 399 aaPredicted RBP11.67□□□□□ -0.54
RFFL-204ENST00000414419 NTSR1P30989 418 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TYRO3Q06418 890 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 RING1Q06587 406 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 E2F5Q15329 346 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 EFHC1Q5JVL4 640 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 OR6B2Q6IFH4 312 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 CAVIN1Q6NZI2 390 aaKnown RBP11.67□□□□□ -0.54
RFFL-204ENST00000414419 TMEM92Q6UXU6 159 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TOGARAM2Q6ZUX3 1019 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 BEND5Q7L4P6 421 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 ABCA7Q8IZY2 2146 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 DQX1Q8TE96 717 aaKnown RBP11.67□□□□□ -0.54
RFFL-204ENST00000414419 TMA16Q96EY4 203 aaKnown RBP11.67□□□□□ -0.54
RFFL-204ENST00000414419 STK33Q9BYT3 514 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 SLC2A11Q9BYW1 496 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TPSD1Q9BZJ3 242 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 ZDHHC4Q9NPG8 344 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 PLCB1Q9NQ66 1216 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TMEM63CQ9P1W3 806 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 CYTH4Q9UIA0 394 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 NAALADL1Q9UQQ1 740 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 SLC27A6Q9Y2P4 619 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 STARD13Q9Y3M8 1113 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 CFAP54Q96N23 3096 aa11.67□□□□□ -0.54
RFFL-204ENST00000414419 TCRBV21S2A2A0A5A6 115 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 TYW5A2RUC4 315 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 PRRT4C9JH25 899 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 ACSL4O60488 711 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 RHOBTB1O94844 696 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 APOEP02649 317 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 RETP07949 1114 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 GLI1P08151 1106 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 CISD3P0C7P0 127 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 HOXB2P14652 356 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 CYP11B1P15538 503 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 GBP1P32455 592 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 WASP42768 502 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 COPB1P53618 953 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
RFFL-204ENST00000414419 ARID5AQ03989 594 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 NNTQ13423 1086 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 ELF2Q15723 593 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 DCAF6Q58WW2 860 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 EGFLAMQ63HQ2 1017 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 ANKS1BQ7Z6G8 1248 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 C11orf74Q86VG3 221 aa11.66□□□□□ -0.54
RFFL-204ENST00000414419 CCDC117Q8IWD4 279 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms