RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 DKK3Q9UBP4 350 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
HERC3-203ENST00000407637 UBE4BO95155 1302 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SHANK3Q9BYB0 1731 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 ZBTB14O43829 449 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 KLHL41O60662 606 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 RFPL1O75677 317 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 CCT8P50990 548 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 HSD17B4P51659 736 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 C16orf46Q6P387 395 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 IGFN1Q86VF2 1251 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SLC26A11Q86WA9 606 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 USP13Q92995 863 aaPredicted RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 ZNF597Q96LX8 424 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 OLFM1Q99784 485 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 CXorf21Q9HAI6 301 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 RBBP6Q7Z6E9 1792 aaKnown RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 CXorf49A8MYA2 514 aaPredicted RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 CSPG5O95196 566 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SNRPAP09012 282 aaKnown RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 NR4A1P22736 598 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SSTR3P32745 418 aaPredicted RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 RPL10AP62906 217 aaKnown RBP13.18□□□□□ -0.3
HERC3-203ENST00000407637 DYNLT1P63172 113 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 NME3Q13232 169 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 TIGD2Q4W5G0 525 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 TEDDM1Q5T9Z0 273 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 FAM47BQ8NA70 645 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
HERC3-203ENST00000407637 KRT37O76014 449 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 CAPNS1P04632 268 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 AKR1B1P15121 316 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 PTPN2P17706 415 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 MAPK10P53779 464 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 PSMC5P62195 406 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 PRAMEP78395 509 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 BASP1P80723 227 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 IKBKEQ14164 716 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 ANGEL2Q5VTE6 544 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 ATG14Q6ZNE5 492 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 UBR7Q8N806 425 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 TRUB1Q8WWH5 349 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 NKD2Q969F2 451 aaPredicted RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 SERPINI1Q99574 410 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 STN1Q9H668 368 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 SLC8A2Q9UPR5 921 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 CARD8Q9Y2G2 431 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 CYP3A7-CYP3A51PA0A087WV96 503 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 ERVV-1B6SEH8 477 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 HSPA8P11142 646 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 CYP3A7P24462 503 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 NSFP46459 744 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 SLC1A6P48664 564 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 Q8N9G6 341 aaPredicted RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 PIGBQ92521 554 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
HERC3-203ENST00000407637 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
HERC3-203ENST00000407637 A0A087WXM4 84 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 C1orf232A0A0U1RR37 186 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 CFLARO15519 480 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 ERBB2P04626 1255 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 MCF2P10911 925 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 ZNF182P17025 639 aaPredicted RBP13.16□□□□□ -0.3
HERC3-203ENST00000407637 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
HERC3-203ENST00000407637 HSPA1LP34931 641 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 GRM5P41594 1212 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 SCNN1DP51172 638 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 NRLP54845 237 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 TRAF2Q12933 501 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 KLF10Q13118 480 aa13.16□□□□□ -0.3
HERC3-203ENST00000407637 PMS2P3Q13401 168 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms