RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 ZNF135P52742 658 aaPredicted RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 KYNUQ16719 465 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 SLC39A12Q504Y0 691 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 DNAJC21Q5F1R6 531 aaKnown RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 NAT8LQ8N9F0 302 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 RNF139Q8WU17 664 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 CPT1BQ92523 772 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 PWWP2AQ96N64 755 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 USP29Q9HBJ7 922 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 SAYSD1Q9NPB0 183 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 DDIT4Q9NX09 232 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 FBXW11Q9UKB1 542 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 NOVA2Q9UNW9 492 aaKnown RBP13.55□□□□□ -0.24
SNU13-203ENST00000401959 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
SNU13-203ENST00000401959 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.248e-6■■■■■ 107
SNU13-203ENST00000401959 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 HACD1B0YJ81 288 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 SHOX2O60902 331 aaPredicted RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 ZNF189O75820 626 aaPredicted RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 ABHD2P08910 425 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 AMPD1P23109 780 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 ARL4CP56559 192 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 ELAVL2Q12926 359 aaKnown RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 SLC45A4Q5BKX6 768 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 SUGP1Q8IWZ8 645 aaKnown RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 PYROXD2Q8N2H3 581 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 TLCD1Q96CP7 247 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 TOX2Q96NM4 488 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 WDR6Q9NNW5 1121 aaKnown RBP13.54□□□□□ -0.24
SNU13-203ENST00000401959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNU13-203ENST00000401959 PLXNA3P51805 1871 aa13.54□□□□□ -0.24
SNU13-203ENST00000401959 TLDC2A0PJX2 215 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 ALOX15BO15296 676 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 AGTP01019 485 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 RBL1P28749 1068 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 MAGEA11P43364 429 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 HCAR3P49019 387 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CXCR3P49682 368 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SLC5A3P53794 718 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 BASP1P80723 227 aaKnown RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 GBE1Q04446 702 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 MRPL58Q14197 206 aaKnown RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 HIF1AQ16665 826 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 MFSD5Q6N075 450 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 PPP1R21Q6ZMI0 780 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 EDEM1Q92611 657 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SCLYQ96I15 445 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 C8orf48Q96LL4 319 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 QKIQ96PU8 341 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNU13-203ENST00000401959 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CAPS2Q9BXY5 557 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 MAGEB5Q9BZ81 275 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 TBKBP1A7MCY6 615 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 TNFRSF10BO14763 440 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CHADO15335 359 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CREB3O43889 395 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 TCEA3O75764 348 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 FGFR3P22607 806 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SLC11A1P49279 550 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 GATMP50440 423 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CCL23P55773 120 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNU13-203ENST00000401959 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SLC10A2Q12908 348 aaPredicted RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 STAT4Q14765 748 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 C1orf53Q5VUE5 145 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 BTBD8Q5XKL5 378 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 RFX8Q6ZV50 586 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 PDZD4Q76G19 769 aaPredicted RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 CEP57Q86XR8 500 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 CRIPAKQ8N1N5 446 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 SCAMP5Q8TAC9 235 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 EPS8L3Q8TE67 593 aaKnown RBP13.53□□□□□ -0.24
SNU13-203ENST00000401959 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
SNU13-203ENST00000401959 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms