RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MARCOQ9UEW3 520 aaPredicted RBP14.48□□□□□ -0.09
SCAF4-202ENST00000399804 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
SCAF4-202ENST00000399804 PAPSS1O43252 624 aaPredicted RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 BANF1O75531 89 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TCF4P15884 667 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TUBP50607 506 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 USP10Q14694 798 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SDHAF4Q5VUM1 108 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 AGR3Q8TD06 166 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SCG3Q8WXD2 468 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TSSK1BQ9BXA7 367 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ETNK1Q9HBU6 452 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ZFP69BQ9UJL9 534 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ARL5CA6NH57 179 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 NCAM2O15394 837 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 USP12O75317 370 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ANXA9O76027 345 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 PURAQ00577 322 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 FASTKD1Q53R41 847 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SLC45A4Q5BKX6 768 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SH3PXD2AQ5TCZ1 1133 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 DCLRE1AQ6PJP8 1040 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 FAM228AQ86W67 206 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SLC26A11Q86WA9 606 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ARMC2Q8NEN0 867 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 RAB3IL1Q8TBN0 382 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 FAXDC2Q96IV6 333 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TTC1Q99614 292 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ZNF670Q9BS34 389 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 PRDM12Q9H4Q4 367 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 UBA6A0AVT1 1052 aaPredicted RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 GOLGA8CPA6NN73 597 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 YWHAQP27348 245 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 AUHQ13825 339 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 BMPR2Q13873 1038 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SPDYCQ5MJ68 293 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 FBXW10Q5XX13 1052 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 TXNRD3NBQ6F5E7 133 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 NAT9Q9BTE0 207 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 RBM22Q9NW64 420 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■■■■ 34.8
SCAF4-202ENST00000399804 PTCH2Q9Y6C5 1203 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 MYBPHLA2RUH7 354 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 NT5C1B-RDH14C9J2C7 533 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 FKTNO75072 461 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 ACCSLQ4AC99 568 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 SAPCD2Q86UD0 394 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 MYLK4Q86YV6 388 aaPredicted RBP14.47□□□□□ -0.09
SCAF4-202ENST00000399804 LGMNQ99538 433 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 MUC3BQ9H195 1237 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 GTF2IRD1Q9UHL9 959 aa14.47□□□□□ -0.09
SCAF4-202ENST00000399804 C2CD4BA6NLJ0 364 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 OPHN1O60890 802 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 ZWINTO95229 277 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 GRK4P32298 578 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 PTGIRP43119 386 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 TBX4P57082 545 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 DEFB118Q96PH6 123 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 CYP4F11Q9HBI6 524 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 APOBEC2Q9Y235 224 aaKnown RBP14.46□□□□□ -0.09
SCAF4-202ENST00000399804 NUDT17P0C025 328 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 TPH1P17752 444 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 SLC11A2P49281 568 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 GDF6Q6KF10 455 aaPredicted RBP14.46□□□□□ -0.09
SCAF4-202ENST00000399804 SLC26A9Q7LBE3 791 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 GIPC2Q8TF65 315 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 ATP6V1E2Q96A05 226 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 PTPN18Q99952 460 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 EFR3BQ9Y2G0 817 aa14.46□□□□□ -0.09
SCAF4-202ENST00000399804 BRWD3Q6RI45 1802 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 DIAPH2O60879 1101 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 AOC2O75106 756 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 ERCC2P18074 760 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 CYP3A5P20815 502 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 SNCBQ16143 134 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 SLC25A52Q3SY17 297 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 LINC00523Q86TU6 105 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 DDX50Q9BQ39 737 aaKnown RBP14.46□□□□□ -0.1
SCAF4-202ENST00000399804 BCO2Q9BYV7 579 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 LRRC40Q9H9A6 602 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 TMEM39AQ9NV64 488 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 ETNK2Q9NVF9 386 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 ADGRA2Q96PE1 1338 aa14.46□□□□□ -0.1
SCAF4-202ENST00000399804 AGPSO00116 658 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 HAUS5O94927 633 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 OR4Q2P0C623 313 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 RECQLP46063 649 aaPredicted RBP14.45□□□□□ -0.1
SCAF4-202ENST00000399804 RABGGTBP53611 331 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SESN3P58005 492 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SKOR1P84550 965 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SLC20A2Q08357 652 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 UGP2Q16851 508 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
SCAF4-202ENST00000399804 SLC24A5Q71RS6 500 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms