RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 TBC1D21Q8IYX1 336 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ELMOD2Q8IZ81 293 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 IFNL2Q8IZJ0 200 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 CPSF7Q8N684 471 aaKnown RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 TC2NQ8N9U0 490 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ARRDC4Q8NCT1 418 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 PPHLN1Q8NEY8 458 aaKnown RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 CEP70Q8NHQ1 597 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ABHD4Q8TB40 342 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 FANK1Q8TC84 345 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 RAPGEF5Q92565 580 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF641Q96N77 438 aaPredicted RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 FRMD6Q96NE9 622 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ZIM3Q96PE6 472 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 VPS35Q96QK1 796 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 NEURL2Q9BR09 285 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ACAT2Q9BWD1 397 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 TEKT3Q9BXF9 490 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 KLC2Q9H0B6 622 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF700Q9H0M5 742 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 LMAN2LQ9H0V9 348 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ISCUQ9H1K1 167 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 EHD4Q9H223 541 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 TMEM245Q9H330 911 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 AZI2Q9H6S1 392 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 C17orf75Q9HAS0 396 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF287Q9HBT7 754 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ATP13A1Q9HD20 1204 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 MLXIPLQ9NP71 852 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 IARS2Q9NSE4 1012 aaKnown RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 C20orf96Q9NUD7 363 aaPredicted RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 PARVAQ9NVD7 372 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 FBXO28Q9NVF7 368 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 C19orf73Q9NVV2 129 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 NMRK1Q9NWW6 199 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 EHD3Q9NZN3 535 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 TUBE1Q9UJT0 475 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 PLAAQ9Y263 795 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 MED16Q9Y2X0 877 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 HYOU1Q9Y4L1 999 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 KCTD3Q9Y597 815 aa3.73□□□□□ -1.81
XRCC4-203ENST00000396027 NPHP4O75161 1426 aaPredicted RBP3.73□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF536O15090 1300 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SF3B1O75533 1304 aaKnown RBP eCLIP3.72□□□□□ -1.814e-6■■■■■ 139.6
XRCC4-203ENST00000396027 MROH5Q6ZUA9 1318 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 AKAP12Q02952 1782 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PZPP20742 1482 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ADCY9O60503 1353 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PNMA6FA0A0J9YX94 578 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PRR23AA6NEV1 266 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CCDC160A6NGH7 325 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PRSS44E7EML9 344 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 L7N2F9 121 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PLOD2O00469 737 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 POLR2DO15514 142 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DENRO43583 198 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 NDUFA2O43678 99 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 MAGEC1O60732 1142 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DKC1O60832 514 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 NOL3O60936 208 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PEX11AO75192 247 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 DGKIO75912 1065 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RSL1D1O76021 490 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EPN2O95208 641 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PLEKHA8P1O95397 391 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 APOC1P02654 83 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 NUDT17P0C025 328 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SLC2A3P11169 496 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ITIH2P19823 946 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 MUTP22033 750 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 CMA1P23946 247 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EVI2BP34910 448 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ETFBP38117 255 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SLC26A3P40879 764 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PPP1R2P41236 205 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PLTPP55058 493 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TSPAN5P62079 268 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PFKPQ01813 784 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PRKCEQ02156 737 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EXOSC9Q06265 439 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ZNF211Q13398 564 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 GIT2Q14161 759 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 GALNT3Q14435 633 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PLS1Q14651 629 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 KCNAB1Q14722 419 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 NCF4Q15080 339 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TOMM20Q15388 145 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SLC15A2Q16348 729 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 TRIM16LQ309B1 348 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 LSM12Q3MHD2 195 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ANKRD20A4Q4UJ75 823 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 LBHQ53QV2 105 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 BRDTQ58F21 947 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 RUNDC3AQ59EK9 446 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 EARS2Q5JPH6 523 aaKnown RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 C6orf183Q5T699 404 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 AGAP7PQ5VUJ5 663 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 ARHGEF16Q5VV41 709 aa3.72□□□□□ -1.81
XRCC4-203ENST00000396027 PEAR1Q5VY43 1037 aaPredicted RBP3.72□□□□□ -1.81
XRCC4-203ENST00000396027 SHEQ5VZ18 495 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms