RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 ANKRD22Q5VYY1 191 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ZCCHC23Q6ZST2 131 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ZNF420Q8TAQ5 688 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 HCAR2Q8TDS4 363 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 NAP1L4Q99733 375 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 APOL6Q9BWW8 343 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PNPLA3Q9NST1 481 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ANKMY1Q9P2S6 941 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 SLC8A2Q9UPR5 921 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 KPNA4O00629 521 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TEX28O15482 410 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 CXCR2P25025 360 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ADSLP30566 484 aaPredicted RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 GRIA3P42263 894 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ACADSBP45954 432 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TGFB2P61812 414 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PPP2R5DQ14738 602 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 HIF1AQ16665 826 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 GPR107Q5VW38 600 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 BTBD8Q5XKL5 378 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 ATG16L1Q676U5 607 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TMEM26Q6ZUK4 368 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TTC30AQ86WT1 665 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 SLC38A6Q8IZM9 456 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 FBXO36Q8NEA4 188 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 PDZD8Q8NEN9 1154 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 DCPSQ96C86 337 aaKnown RBP9.85□□□□□ -0.83
SF3A3-201ENST00000373019 SPATA17Q96L03 361 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 KLHL32Q96NJ5 620 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TMEM47Q9BQJ4 181 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 FERMT1Q9BQL6 677 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 DAPK2Q9UIK4 370 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 DNAJC16Q9Y2G8 782 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 TRAF6Q9Y4K3 522 aa9.85□□□□□ -0.83
SF3A3-201ENST00000373019 GIPC1O14908 333 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 NAT2P11245 290 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 XRCC1P18887 633 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 MAPK4P31152 587 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 IDUAP35475 653 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 MYL7Q01449 175 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 CCDC58Q4VC31 144 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 DALRD3Q5D0E6 543 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ZC3H7AQ8IWR0 971 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 EXD1Q8NHP7 514 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 KCNK16Q96T55 309 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TMEM79Q9BSE2 394 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 FRMD8Q9BZ67 464 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SNX25Q9H3E2 840 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 COQ10BQ9H8M1 238 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SCUBE2Q9NQ36 999 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 FBXO9Q9UK97 447 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SHOC2Q9UQ13 582 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GPSM3Q9Y4H4 160 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ST14Q9Y5Y6 855 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TRIM64A6NGJ6 449 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 WTIPA6NIX2 430 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GCNT3O95395 438 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 KRT75O95678 551 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 KCNA2P16389 499 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 DPEP1P16444 411 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TM4SF1P30408 202 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 THOP1P52888 689 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TPTEP56180 551 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ERFEQ4G0M1 354 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 LLGL2Q6P1M3 1020 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GALNT18Q6P9A2 607 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GRAMD2AQ8IUY3 354 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 MYO1HQ8N1T3 1032 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 LSM14AQ8ND56 463 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SENP7Q9BQF6 1050 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 VAT1LQ9HCJ6 419 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 KAT6AQ92794 2004 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 FAM155BO75949 473 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ABCB1P08183 1280 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 NMT1P30419 496 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 POLR2BP30876 1174 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TAS2R40P59535 323 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 DLG4P78352 724 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 IFITM3Q01628 133 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 IKBKEQ14164 716 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ZFP1Q6P2D0 407 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GALNT13Q8IUC8 556 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 IGDCC3Q8IVU1 814 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 ESX1Q8N693 406 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TTLL6Q8N841 843 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 GOLM1Q8NBJ4 401 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SLC44A1Q8WWI5 657 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 MED30Q96HR3 178 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 SLC29A1Q99808 456 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 HOXD1Q9GZZ0 328 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 RNF38Q9H0F5 515 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 TP63Q9H3D4 680 aaPredicted RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 NANOGQ9H9S0 305 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.84□□□□□ -0.834e-8■□□□□ 9.2
SF3A3-201ENST00000373019 SERPINA10Q9UK55 444 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 AGO2Q9UKV8 859 aaKnown RBP9.84□□□□□ -0.83
SF3A3-201ENST00000373019 JAG2Q9Y219 1238 aa9.84□□□□□ -0.83
SF3A3-201ENST00000373019 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms