RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 RBM12Q9NTZ6 932 aaKnown RBP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL5A1-202ENST00000371820 ZSCAN32Q9NX65 697 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 RASAL2Q9UJF2 1139 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 MYH10P35580 1976 aa10.88□□□□□ -0.67
COL5A1-202ENST00000371820 NCANO14594 1321 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 TRAV19A0A0A6YYK7 116 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 ANKRD62A6NC57 917 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 CEP104O60308 925 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 CPP00450 1065 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 USP17L7P0C7H9 530 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 BDNFP23560 247 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 GTF2H1P32780 548 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 PPP3CCP48454 512 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 GPR15P49685 360 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 KPNA1P52294 538 aaPredicted RBP10.87□□□□□ -0.67
COL5A1-202ENST00000371820 JAM2P57087 298 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 GNGT1P63211 74 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 PTK2Q05397 1052 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 MTAPQ13126 283 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 DHX34Q14147 1143 aaKnown RBP10.87□□□□□ -0.67
COL5A1-202ENST00000371820 LRRC32Q14392 662 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 ZNF268Q14587 947 aaPredicted RBP10.87□□□□□ -0.67
COL5A1-202ENST00000371820 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 TCERG1LQ5VWI1 586 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 SCARA3Q6AZY7 606 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 TSSK4Q6SA08 328 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 UBL4BQ8N7F7 174 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 TPCN2Q8NHX9 752 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 MAIP1Q8WWC4 291 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 FAM3CQ92520 227 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 C8orf48Q96LL4 319 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 SLITRK1Q96PX8 696 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 KRT12Q99456 494 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 SLC46A2Q9BY10 475 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 EPN3Q9H201 632 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 CARD9Q9H257 536 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 CHRDQ9H2X0 955 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 CNOT10Q9H9A5 744 aaKnown RBP10.87□□□□□ -0.67
COL5A1-202ENST00000371820 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 TFR2Q9UP52 801 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 PIAS3Q9Y6X2 628 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 DNAH14Q0VDD8 3507 aa10.87□□□□□ -0.67
COL5A1-202ENST00000371820 MED19A0JLT2 244 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TMCO5BA8MYB1 307 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 ARNTLO00327 626 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 KRIT1O00522 736 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 HCRTO43612 131 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 AKAP3O75969 853 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 RTN3O95197 1032 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 ASS1P00966 412 aaKnown RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 HLA-DRAP01903 254 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 CKMP06732 381 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TDGF1P13385 188 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 CXCR5P32302 372 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 NOP14P78316 857 aaKnown RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 DLG4P78352 724 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 PUM1Q14671 1186 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 SDHAF4Q5VUM1 108 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 PPP1R2P3Q6NXS1 205 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 DGLUCYQ7Z3D6 616 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 ZNF571Q7Z3V5 609 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 UNC93AQ86WB7 457 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 RALGPS2Q86X27 583 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TTC39CQ8N584 583 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 PDZD8Q8NEN9 1154 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 RFFLQ8WZ73 363 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 SLC35C1Q96A29 364 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 SMARCD1Q96GM5 515 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 FAXDC2Q96IV6 333 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 ZIM3Q96PE6 472 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 MED10Q9BTT4 135 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TTLL2Q9BWV7 592 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 FAM126AQ9BYI3 521 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 SMYD3Q9H7B4 428 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 CYP3A43Q9HB55 503 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TMEM8AQ9HCN3 771 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TDP1Q9NUW8 608 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 TRPM5Q9NZQ8 1165 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 NCDNQ9UBB6 729 aa10.86□□□□□ -0.67
COL5A1-202ENST00000371820 NDRG2Q9UN36 371 aaKnown RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 SMG5Q9UPR3 1016 aaKnown RBP10.86□□□□□ -0.67
COL5A1-202ENST00000371820 OBSL1O75147 1896 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 NCOR2Q9Y618 2525 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 F8VP50 259 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 VNN1O95497 513 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 PRAMEF12O95522 483 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 MYBL2P10244 700 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 GZMAP12544 262 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 SLC9A1P19634 815 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 GCLMP48507 274 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 FMO5P49326 533 aa10.85□□□□□ -0.67
COL5A1-202ENST00000371820 MCCD1P59942 119 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms