RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 FHL3Q13643 280 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 RRS1Q15050 365 aaKnown RBP6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 LY6KQ17RY6 165 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 TTC9BQ8N6N2 239 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 MBD3L2Q8NHZ7 208 aaPredicted RBP6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC30A5Q8TAD4 765 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 ABHD5Q8WTS1 349 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 ATRIPQ8WXE1 791 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 UBXN10Q96LJ8 280 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 C8orf49Q96NF6 230 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 C17orf80Q9BSJ5 609 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 RTKNQ9BST9 563 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZCWPW1Q9H0M4 648 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 PABPC3Q9H361 631 aaKnown RBP6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 PARPBPQ9NWS1 579 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 DKK2Q9UBU2 259 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 MEGF6O75095 1541 aa6.43□□□□□ -1.38
RNU4-39P-201ENST00000362455 EDC4Q6P2E9 1401 aaKnown RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 HMX3A6NHT5 357 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 BTBD11A6QL63 1104 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 J3KTA2 159 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 EIF3FO00303 357 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZSCAN9O15535 394 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 SNX2O60749 519 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 SPDEFO95238 335 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 ERBB2P04626 1255 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 ANXA6P08133 673 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 KLRK1P26718 216 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 RBL1P28749 1068 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 EPHA3P29320 983 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 AP2B1P63010 937 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 CCDC70Q6NSX1 233 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 LVRNQ6Q4G3 990 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 MMS22LQ6ZRQ5 1243 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 C1orf210Q8IVY1 113 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 CCDC117Q8IWD4 279 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 PALM2Q8IXS6 379 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 IZUMO1Q8IYV9 350 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 SCAMP5Q8TAC9 235 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 EXTL1Q92935 676 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 FUBP1Q96AE4 644 aaKnown RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 C20orf173Q96LM9 149 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZSCAN31Q96LW9 406 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 INO80BQ9C086 356 aaPredicted RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 MAF1Q9H063 256 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 PRDM8Q9NQV8 689 aa6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 LRRFIP2Q9Y608 721 aaKnown RBP6.42□□□□□ -1.38
RNU4-39P-201ENST00000362455 KRTAP9-6A0A140TA67 174 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 TMEM200CA6NKL6 621 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 FYB1O15117 783 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 NCAM2O15394 837 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 DHHO43323 396 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 AGR2O95994 175 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 LAG3P18627 525 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 CD53P19397 219 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 CST5P28325 142 aaPredicted RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 HTR7P34969 479 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 CTSWP56202 376 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 GRM4Q14833 912 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 RALBP1Q15311 655 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 USP39Q53GS9 565 aaKnown RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC9A4Q6AI14 798 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 CLEC9AQ6UXN8 241 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC44A2Q8IWA5 706 aaPredicted RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 NRSN1Q8IZ57 195 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 B3GALNT2Q8NCR0 500 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SSH3Q8TE77 659 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC25A43Q8WUT9 341 aaPredicted RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 LPIN2Q92539 896 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 RILPL2Q969X0 211 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 MYEOVQ96EZ4 313 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 DDX23Q9BUQ8 820 aaKnown RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 VN1R3Q9BXE9 311 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZNF703Q9H7S9 590 aaPredicted RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SAYSD1Q9NPB0 183 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 FSCN3Q9NQT6 498 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SMPD4Q9NXE4 827 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 KIF17Q9P2E2 1029 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 PGAP2Q9UHJ9 254 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 CNOT11Q9UKZ1 510 aaKnown RBP6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 RIMKLBQ9ULI2 386 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 USP22Q9UPT9 525 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 SLC27A6Q9Y2P4 619 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 QRICH2Q9H0J4 1663 aa6.41□□□□□ -1.38
RNU4-39P-201ENST00000362455 PNMA6EA0A0J9YXQ4 647 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 ZAR1LA6NP61 321 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 FAM155BO75949 473 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 VNN1O95497 513 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 SRGNP10124 158 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 AKT1P31749 480 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 MTHFSP49914 203 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 ATXN1P54253 815 aaKnown RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 SCAPQ12770 1279 aa6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 EIF2B5Q13144 721 aaKnown RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 SF3B3Q15393 1217 aaKnown RBP6.4□□□□□ -1.38
RNU4-39P-201ENST00000362455 TAF12Q16514 161 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms