RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 NOX5Q96PH1 765 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 FBXO10Q9UK96 956 aa28.81■■■□□ 2.2
ATPAF1-201ENST00000329231 PAPSS1O43252 624 aaPredicted RBP28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 PNMA6AP0CW24 399 aaPredicted RBP28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 DGKEP52429 567 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 ZNF445P59923 1031 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 KLHL40Q2TBA0 621 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 NUGGCQ68CJ6 796 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 LAIR1Q6GTX8 287 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 UNC45BQ8IWX7 931 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 ZNF513Q8N8E2 541 aaPredicted RBP28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 GAB3Q8WWW8 586 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 PLCB1Q9NQ66 1216 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 GMEB2Q9UKD1 530 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 STARD13Q9Y3M8 1113 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 CEP83Q9Y592 693 aa28.8■■■□□ 2.2
ATPAF1-201ENST00000329231 CAPN9O14815 690 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 RPP40O75818 363 aaKnown RBP28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 FYNP06241 537 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 CISD3P0C7P0 127 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 SNX16P57768 344 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 TYRO3Q06418 890 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 RING1Q06587 406 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 PASD1Q8IV76 773 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 WDTC1Q8N5D0 677 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 DDI1Q8WTU0 396 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 PPP1R13BQ96KQ4 1090 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 SERPINB11Q96P15 392 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 NAA15Q9BXJ9 866 aaKnown RBP28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 NAT10Q9H0A0 1025 aaKnown RBP28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 STOML2Q9UJZ1 356 aa28.79■■■□□ 2.2
ATPAF1-201ENST00000329231 GPR179Q6PRD1 2367 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 SGK1O00141 431 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 IGLV3-27P01718 113 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 TBX4P57082 545 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 LPAL2Q16609 132 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 MPPE1Q53F39 396 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 ADGRF1Q5T601 910 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 TOGARAM2Q6ZUX3 1019 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 DCLK2Q8N568 766 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 DQX1Q8TE96 717 aaKnown RBP28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 P2RY11Q96G91 374 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 STK33Q9BYT3 514 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 POPDC2Q9HBU9 364 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 NAALADL1Q9UQQ1 740 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 SLC27A6Q9Y2P4 619 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 OTOGLQ3ZCN5 2332 aa28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 EP300Q09472 2414 aaPredicted RBP28.78■■■□□ 2.2
ATPAF1-201ENST00000329231 ALDH1A2O94788 518 aa28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 CDK11BP21127 795 aaKnown RBP28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 SLC11A2P49281 568 aa28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 YWHAZP63104 245 aaKnown RBP28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 NNTQ13423 1086 aa28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 C1orf131Q8NDD1 294 aaKnown RBP28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 CPXM1Q96SM3 734 aa28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 POLMQ9NP87 494 aaPredicted RBP28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 LIMA1Q9UHB6 759 aaKnown RBP28.77■■■□□ 2.2
ATPAF1-201ENST00000329231 ADAM23O75077 832 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 CYP11B1P15538 503 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 COPB1P53618 953 aaKnown RBP28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 ANO7Q6IWH7 933 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 TMEM92Q6UXU6 159 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 SLC2A11Q9BYW1 496 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 PDCL3Q9H2J4 239 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 ZDHHC4Q9NPG8 344 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 TLR6Q9Y2C9 796 aa28.76■■■□□ 2.19
ATPAF1-201ENST00000329231 PRRT4C9JH25 899 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 GLI1P08151 1106 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 SYPL2Q5VXT5 272 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 SDE2Q6IQ49 451 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 CACNA2D4Q7Z3S7 1137 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 RASSF3Q86WH2 238 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 GPR161Q8N6U8 529 aaKnown RBP28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 IPO4Q8TEX9 1081 aaKnown RBP28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 AZIN2Q96A70 460 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 TMA16Q96EY4 203 aaKnown RBP28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 TJP2Q9UDY2 1190 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 DAAM1Q9Y4D1 1078 aa28.75■■■□□ 2.19
ATPAF1-201ENST00000329231 F8VZ95 297 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 TSPAN3O60637 253 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 RETP07949 1114 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 NTSR1P30989 418 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 NCAPHQ15003 741 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 EFHC1Q5JVL4 640 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 EGFLAMQ63HQ2 1017 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 TMEM35BQ8NCS4 154 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 IRX2Q9BZI1 471 aaPredicted RBP28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 GANQ9H2C0 597 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 SYNCQ9H7C4 482 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 ASNSD1Q9NWL6 643 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 HCN2Q9UL51 889 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 GVINP1Q7Z2Y8 2422 aa28.74■■■□□ 2.19
ATPAF1-201ENST00000329231 LRRC10BA6NIK2 292 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 LGALS16A8MUM7 142 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 GFRA2O00451 464 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 ACSL4O60488 711 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 HNRNPLP14866 589 aaKnown RBP eCLIP28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 ZNF18P17022 549 aa28.73■■■□□ 2.19
ATPAF1-201ENST00000329231 ANO6Q4KMQ2 910 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms