RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 DCTN3O75935 186 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TTC4O95801 387 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CYP11B1P15538 503 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 RPA3P35244 121 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CPA2P48052 419 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 IL9RQ01113 521 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 KRT17Q04695 432 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 SOX4Q06945 474 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 SLC1A5Q15758 541 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 DUOXA2Q1HG44 320 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TDRD10Q5VZ19 366 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 FAM109BQ6ICB4 259 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 GLB1LQ6UWU2 654 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 NOP9Q86U38 636 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 PPFIBP2Q8ND30 876 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 PTCD3Q96EY7 689 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ANKRD36BP1Q96IX9 119 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CLPTM1LQ96KA5 538 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ARHGEF38Q9NXL2 777 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 UVRAGQ9P2Y5 699 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ZNF148Q9UQR1 794 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 SMIM28A0A1B0GU29 152 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ARL5CA6NH57 179 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 BOLA2-SMG1P6H3BVE0 249 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 PGM3O95394 542 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 PABPC4LP0CB38 370 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 COILP38432 576 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CD151P48509 253 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 IKBKEQ14164 716 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ZPBP2Q6X784 338 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 AGMOQ6ZNB7 445 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TRMT10CQ7L0Y3 403 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 SLC9A9Q8IVB4 645 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 C4orf33Q8N1A6 199 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 STKLD1Q8NE28 680 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 EPS8L1Q8TE68 723 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 DENND1AQ8TEH3 1009 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 AUTS2Q8WXX7 1259 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 C9orf72Q96LT7 481 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 RSAD1Q9HA92 442 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TMEM8AQ9HCN3 771 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 DPP3Q9NY33 737 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 GTF3C4Q9UKN8 822 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 NCANO14594 1321 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CNTNAP2Q9UHC6 1331 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ENPP3O14638 875 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 GYG2O15488 501 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CCDC166P0CW27 439 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 GZMAP12544 262 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TMED1Q13445 227 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 BTG3Q14201 252 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TMED2Q15363 201 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 SIX1Q15475 284 aaPredicted RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 GSTA3Q16772 222 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 TTC7BQ86TV6 843 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 OR6B3Q8NGW1 331 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 ECSITQ9BQ95 431 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 CENPKQ9BS16 269 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 STRA6Q9BX79 667 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 DMAC2Q9NW81 257 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 NINJ2Q9NZG7 142 aa10.7□□□□□ -0.7
ABCF1-201ENST00000326195 RBBP6Q7Z6E9 1792 aaKnown RBP10.7□□□□□ -0.7
ABCF1-201ENST00000326195 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 FAM47DPA6NHR8 397 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 OPHN1O60890 802 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 ITGB1P05556 798 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 ZNF24P17028 368 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 CLCNKBP51801 687 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 CDC16Q13042 620 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 GPNMBQ14956 572 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 ZNF699Q32M78 642 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 UBXN11Q5T124 520 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 C11orf63Q6NUN7 778 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 TMEM270Q6UE05 265 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 SCUBE1Q8IWY4 988 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 RIN3Q8TB24 985 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 TRIM11Q96F44 468 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 TTC1Q99614 292 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 FAM118BQ9BPY3 351 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 FAM49BQ9NUQ9 324 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 COL6A3P12111 3177 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 VILLO15195 856 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 KRT15P19012 456 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 GARTP22102 1010 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 MAN1A1P33908 653 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 EMP3P54852 163 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 PSMC1P62191 440 aaKnown RBP10.69□□□□□ -0.7
ABCF1-201ENST00000326195 NFIL3Q16649 462 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 TRIM71Q2Q1W2 868 aaKnown RBP10.69□□□□□ -0.7
ABCF1-201ENST00000326195 C9orf50Q5SZB4 431 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 RHBDF2Q6PJF5 856 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 RAPH1Q70E73 1250 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 ZBTB8BQ8NAP8 495 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-201ENST00000326195 ZNF212Q9UDV6 495 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
ABCF1-201ENST00000326195 PPM1HQ9ULR3 514 aa10.69□□□□□ -0.7
ABCF1-201ENST00000326195 LDHAP00338 332 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms