RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 TMEM63BQ5T3F8 832 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 MFSD14CQ5VZR4 134 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 BTN2A2Q8WVV5 523 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 PHF21BQ96EK2 531 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 TMEM176AQ96HP8 235 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 THAP1Q9NVV9 213 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 ABI2Q9NYB9 513 aaPredicted RBP16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 STMN3Q9NZ72 180 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
SH3RF1-201ENST00000284637 DNM1LO00429 736 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 LSM1O15116 133 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 TPH1P17752 444 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CDK16Q00536 496 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 PDK3Q15120 406 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CBWD6Q4V339 395 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CBWD3Q5JTY5 395 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CBWD5Q5RIA9 395 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 WDR59Q6PJI9 974 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 TRIM69Q86WT6 500 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CHST13Q8NET6 341 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 PTPRHQ9HD43 1115 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 AK5Q9Y6K8 562 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 KANSL1LA0AUZ9 987 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 TAF4O00268 1085 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 DCXO43602 365 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 STAG3L1P0CL83 205 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 IMPDH2P12268 514 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 RPA3P35244 121 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CYP51A1Q16850 503 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 OTUD3Q5T2D3 398 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 C3orf67Q6ZVT6 689 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 DDX53Q86TM3 631 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 C17orf50Q8WW18 174 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 FICDQ9BVA6 458 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 OSBPL7Q9BZF2 842 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 ADCY6O43306 1168 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 SUPT20HL2P0C7V6 817 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 TRAF2Q12933 501 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 RIPOR1Q6ZS17 1223 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 MIB1Q86YT6 1006 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CENPLQ8N0S6 344 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 FLCNQ8NFG4 579 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 SMAD5Q99717 465 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 ROGDIQ9GZN7 287 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 ITM2BQ9Y287 266 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CEP170BQ9Y4F5 1589 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 WDR27A2RRH5 827 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM86B1E9PN63 330 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 WBP4O75554 376 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 EIF2S1P05198 315 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 ST13P50502 369 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 CES3Q6UWW8 571 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 RBM44Q6ZP01 1051 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 OR6Y1Q8NGX8 325 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 GIPC3Q8TF64 312 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 MTERF3Q96E29 417 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 EPS8L2Q9H6S3 715 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 PIDD1Q9HB75 910 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 HMG20AQ9NP66 347 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 LSM7Q9UK45 103 aaKnown RBP16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 VANGL2Q9ULK5 521 aa16.89■□□□□ 0.29
SH3RF1-201ENST00000284637 PROCP04070 461 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ATP5BP06576 529 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 MZF1P28698 734 aaPredicted RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 OR1G1P47890 313 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ELMSAN1Q6PJG2 1045 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 CYP2R1Q6VVX0 501 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 CINPQ9BW66 212 aaPredicted RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 TAS2R14Q9NYV8 317 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 POLLQ9UGP5 575 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 NET1Q7Z628 596 aaPredicted RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 PYDC1Q8WXC3 89 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 TMEM150BA6NC51 233 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ERI2A8K979 691 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 EFCAB14O75071 495 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 SLITRK3O94933 977 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ZNF682O95780 498 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 TTC27Q6P3X3 843 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 RAB42Q8N4Z0 105 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 PRG3Q9Y2Y8 225 aaPredicted RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 RBP1P09455 135 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 CCDC130P13994 396 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 RRP1BQ14684 758 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 POU6F1Q14863 301 aa16.88■□□□□ 0.29
SH3RF1-201ENST00000284637 LIN52Q52LA3 116 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms