RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 VNN1O95497 513 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 C4BPAP04003 597 aaKnown RBP18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 CDH2P19022 906 aaPredicted RBP18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 HSD17B4P51659 736 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 NR1H2P55055 460 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 TEDDM1Q5T9Z0 273 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 FRMD7Q6ZUT3 714 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 MAVSQ7Z434 540 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 RSPH3Q86UC2 560 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 BSNDQ8WZ55 320 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 CMTM5Q96DZ9 223 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 KCNH7Q9NS40 1196 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 TBCCD1Q9NVR7 557 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 COL20A1Q9P218 1284 aa18.26■□□□□ 0.51
CDKN1B-201ENST00000228872 FBXO21O94952 628 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 TOP3BO95985 862 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 PRKCHP24723 683 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 VARSP26640 1264 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 WNT7BP56706 349 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 YWHAZP63104 245 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 MTA1Q13330 715 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 FASTKD1Q53R41 847 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 KCNT1Q5JUK3 1230 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 PLAC1Q9HBJ0 212 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 AK5Q9Y6K8 562 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 FAM189A1O60320 539 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 FAM58BPP0C7Q3 252 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 TNNI1P19237 187 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 KDELR1P24390 212 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 IL1R2P27930 398 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 CD97P48960 835 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 CREB5Q02930 508 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 SLC25A11Q02978 314 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 VGLL4Q14135 290 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 RARS2Q5T160 578 aaKnown RBP18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 MBLAC2Q68D91 279 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 PDPK2PQ6A1A2 396 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 SAMD3Q8N6K7 520 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 ZNF606Q8WXB4 792 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 POPDC2Q9HBU9 364 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 FAIMQ9NVQ4 179 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
CDKN1B-201ENST00000228872 MYH9P35579 1960 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 LOC100653049A0A140TA62 436 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 HNRNPDLO14979 420 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 ZMPSTE24O75844 475 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 KRT34O76011 436 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 KRT38O76015 456 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 CSH1P0DML2 217 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 CSH2P0DML3 217 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 RBP3P10745 1247 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 IDH3AP50213 366 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 HMGCS2P54868 508 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 CLDN10P78369 228 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 TAZQ16635 292 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 XKR9Q5GH70 373 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 ADGRF2Q8IZF7 708 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 CLEC4DQ8WXI8 215 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 MAP3K20Q9NYL2 800 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 ZC3H7BQ9UGR2 993 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 E9PBE3 544 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 MCF2LO15068 1137 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 GSRP00390 522 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 CPA3P15088 417 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 GARTP22102 1010 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 ADGRE1Q14246 886 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 DLK2Q6UY11 383 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 TICAM1Q8IUC6 712 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 BBS5Q8N3I7 341 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 IL31RAQ8NI17 732 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 DHX33Q9H6R0 707 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 IFT122Q9HBG6 1241 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 PCDH18Q9HCL0 1135 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 PADI4Q9UM07 663 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 TDRKHQ9Y2W6 561 aaKnown RBP18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 PTPRJQ12913 1337 aa18.24■□□□□ 0.51
CDKN1B-201ENST00000228872 HMX2A2RU54 273 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 ACAT1P24752 427 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 SLC1A6P48664 564 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 TAP1Q03518 808 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 PRKG1Q13976 671 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 PSMD6Q15008 389 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 AMIGO2Q86SJ2 522 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 MCF2L2Q86YR7 1114 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 THNSL1Q8IYQ7 743 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 RIN3Q8TB24 985 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 FAF2Q96CS3 445 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 LRGUKQ96M69 825 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 DNAJC28Q9NX36 388 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 PAIP2BQ9ULR5 123 aaKnown RBP18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 ADAMTS5Q9UNA0 930 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 IQCA1LA6NCM1 817 aa18.23■□□□□ 0.51
CDKN1B-201ENST00000228872 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms