RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 B3GALNT2Q8NCR0 500 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 TBCBQ99426 244 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 PSMB7Q99436 277 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 CNPY3Q9BT09 278 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 VN1R3Q9BXE9 311 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 FAM126AQ9BYI3 521 aaPredicted RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 TSPYL1Q9H0U9 437 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 MAN1C1Q9NR34 630 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 RBM12Q9NTZ6 932 aaKnown RBP17.97■□□□□ 0.47
PHGDH-234ENST00000642041 RRN3Q9NYV6 651 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 PCYOX1Q9UHG3 505 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 DPP7Q9UHL4 492 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 L1RE1Q9UN81 338 aa17.97■□□□□ 0.47
PHGDH-234ENST00000642041 M0QZQ0 153 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 PHF2O75151 1096 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 POMCP01189 267 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 PROS1P07225 676 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 RDXP35241 583 aaKnown RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 CLCN6P51797 869 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 ZNF143P52747 638 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 PRKCQQ04759 706 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 RNASELQ05823 741 aaKnown RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 C2orf54Q08AI8 447 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 SMARCB1Q12824 385 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 GOLGA7BQ2TAP0 167 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 PPP1R26Q5T8A7 1209 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 ELMSAN1Q6PJG2 1045 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 CEP128Q6ZU80 1094 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 C12orf50Q8NA57 414 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 KBTBD7Q8WVZ9 684 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 SLCO2A1Q92959 643 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 TWNKQ96RR1 684 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 DUSP16Q9BY84 665 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 CXCL16Q9H2A7 254 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 NRDE2Q9H7Z3 1164 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 PNPLA8Q9NP80 782 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 ST7Q9NRC1 585 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 MTF2Q9Y483 593 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-234ENST00000642041 NUMBLQ9Y6R0 609 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 SCN1AP35498 2009 aa17.96■□□□□ 0.47
PHGDH-234ENST00000642041 FAM170BA6NMN3 283 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 ZNF487B1APH4 448 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 DPYSL4O14531 572 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 ATMINO43313 823 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 PAPLNO95428 1278 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 PTPN1P18031 435 aaKnown RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 GPD1P21695 349 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 PSMA2P25787 234 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 DNA2P51530 1060 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 SOX4Q06945 474 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 LAIR1Q6GTX8 287 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 RSPO2Q6UXX9 243 aaPredicted RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 DNAAF5Q86Y56 855 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 SCML4Q8N228 414 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 BBOF1Q8ND07 529 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 SMG7Q92540 1137 aaKnown RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 ELMO3Q96BJ8 720 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 MS4A14Q96JA4 679 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 MCEEQ96PE7 176 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 CPXM1Q96SM3 734 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 KRT12Q99456 494 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 LRRC1Q9BTT6 524 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 LRRC19Q9H756 370 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 GDF3Q9NR23 364 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 MRPL17Q9NRX2 175 aaKnown RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 TBC1D13Q9NVG8 400 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 DDX43Q9NXZ2 648 aaKnown RBP17.95■□□□□ 0.46
PHGDH-234ENST00000642041 RAB23Q9ULC3 237 aa17.95■□□□□ 0.46
PHGDH-234ENST00000642041 SYN3O14994 580 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 TSPY1Q01534 308 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 MLF2Q15773 248 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-234ENST00000642041 OR6B2Q6IFH4 312 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 DRICH1Q6PGQ1 229 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-234ENST00000642041 SLC26A9Q7LBE3 791 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 PSTKQ8IV42 348 aaKnown RBP17.94■□□□□ 0.46
PHGDH-234ENST00000642041 GOLGA6L1Q8N7Z2 621 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 TMEM175Q9BSA9 504 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 PRMT8Q9NR22 394 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-234ENST00000642041 MIOSQ9NXC5 875 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 PCDHB8Q9UN66 801 aa17.94■□□□□ 0.46
PHGDH-234ENST00000642041 SETXQ7Z333 2677 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 RRP9O43818 475 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 B3GAT3O94766 335 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 GAS8O95995 478 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 RETP07949 1114 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 FAM200BP0CF97 657 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 SDC4P31431 198 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 SSR1P43307 286 aaKnown RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 PTPN9P43378 593 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 CLCNKBP51801 687 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 ZNF135P52742 658 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 AIF1P55008 147 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 DSC1Q08554 894 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 NAA30Q147X3 362 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-234ENST00000642041 PDK2Q15119 407 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 CCNG2Q16589 344 aa17.93■□□□□ 0.46
PHGDH-234ENST00000642041 SLC44A4Q53GD3 710 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms