RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 DDX23Q9BUQ8 820 aaKnown RBP7.06□□□□□ -1.28
FAM49B-230ENST00000639004 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
FAM49B-230ENST00000639004 SAP30LQ9HAJ7 183 aa7.06□□□□□ -1.28
FAM49B-230ENST00000639004 SNX15Q9NRS6 342 aa7.06□□□□□ -1.28
FAM49B-230ENST00000639004 ENTPD2Q9Y5L3 495 aa7.06□□□□□ -1.28
FAM49B-230ENST00000639004 M0QZQ0 153 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 ZNF213O14771 459 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 SUV39H1O43463 412 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 GDF5P43026 501 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 PPM1FP49593 454 aaPredicted RBP7.05□□□□□ -1.28
FAM49B-230ENST00000639004 SEMA3BQ13214 749 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 TSTD2Q5T7W7 516 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 DENND2CQ68D51 928 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 PCSK4Q6UW60 755 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 TRABD2AQ86V40 505 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 CPXCR1Q8N123 301 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 NGDNQ8NEJ9 315 aaKnown RBP7.05□□□□□ -1.28
FAM49B-230ENST00000639004 TBC1D5Q92609 795 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 BBC3Q96PG8 261 aaPredicted RBP7.05□□□□□ -1.28
FAM49B-230ENST00000639004 EIF3CQ99613 913 aaKnown RBP7.05□□□□□ -1.28
FAM49B-230ENST00000639004 SCAND2PQ9GZW5 306 aaPredicted RBP7.05□□□□□ -1.28
FAM49B-230ENST00000639004 ITM2CQ9NQX7 267 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 VPS45Q9NRW7 570 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 DAPP1Q9UN19 280 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 CNTN6Q9UQ52 1028 aa7.05□□□□□ -1.28
FAM49B-230ENST00000639004 PPP6R2O75170 966 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 CST5P28325 142 aaPredicted RBP7.04□□□□□ -1.28
FAM49B-230ENST00000639004 CACNA2D1P54289 1103 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 CYP4F2P78329 520 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 TXNL4AP83876 142 aaKnown RBP7.04□□□□□ -1.28
FAM49B-230ENST00000639004 TAF5Q15542 800 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 FAM153CQ494X1 144 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 KIRREL2Q6UWL6 708 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 NAPRTQ6XQN6 538 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 RAB11FIP2Q7L804 512 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 ZNF804AQ7Z570 1209 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 GPR150Q8NGU9 434 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 PPM1EQ8WY54 764 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 TRIM63Q969Q1 353 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 MACROD1Q9BQ69 325 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 PCED1AQ9H1Q7 454 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 VPS16Q9H269 839 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 IL17RBQ9NRM6 502 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 NFU1Q9UMS0 254 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 PCDHB7Q9Y5E2 793 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 PCDHB2Q9Y5E7 798 aa7.04□□□□□ -1.28
FAM49B-230ENST00000639004 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 KIF28PB7ZC32 967 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 FAM155BO75949 473 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 FSHBP01225 129 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 ALADP13716 330 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 ARL4CP56559 192 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 DPTQ07507 201 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 PPFIA1Q13136 1202 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 BIRC3Q13489 604 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 ERCC6LQ2NKX8 1250 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 TTC22Q5TAA0 569 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 NFRKBQ6P4R8 1299 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 OLFML1Q6UWY5 402 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 RFX8Q6ZV50 586 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 SLC29A4Q7RTT9 530 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 KRT27Q7Z3Y8 459 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 ZNF354CQ86Y25 554 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 OR4N4Q8N0Y3 316 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 SIMC1Q8NDZ2 872 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 CAGE1Q8TC20 777 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 RUBCNQ92622 972 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 EDC3Q96F86 508 aaKnown RBP7.03□□□□□ -1.28
FAM49B-230ENST00000639004 MMS19Q96T76 1030 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 TIMP4Q99727 224 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 FAM167BQ9BTA0 163 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.03□□□□□ -1.28
FAM49B-230ENST00000639004 CIPCQ9C0C6 399 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 KCNK9Q9NPC2 374 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 TLK1Q9UKI8 766 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
FAM49B-230ENST00000639004 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 CYR61O00622 381 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 IRAK2O43187 625 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 PRAMEF2O60811 474 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 MBPP02686 304 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 TMIGD3P0DMS9 266 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 ZNF37AP17032 561 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 WT1P19544 449 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 MMP8P22894 467 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 CCT5P48643 541 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 PRKAA2P54646 552 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 INHBCP55103 352 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 GPC5P78333 572 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 CCDC15Q0P6D6 951 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 SF3A3Q12874 501 aaKnown RBP eCLIP7.02□□□□□ -1.29
FAM49B-230ENST00000639004 CEP85Q6P2H3 762 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 MOGAT3Q86VF5 341 aa7.02□□□□□ -1.29
FAM49B-230ENST00000639004 SMAP1Q8IYB5 467 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms