RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 CDKAL1Q5VV42 579 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 MSANTD2Q6P1R3 559 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 DENND1CQ8IV53 801 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 CCDC33Q8N5R6 958 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 RUBCNQ92622 972 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 PLD4Q96BZ4 506 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 SLC4A5Q9BY07 1137 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 DCLK3Q9C098 648 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 MIS12Q9H081 205 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 WDR35Q9P2L0 1181 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 DEC1Q9P2X7 70 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 SPAG17Q6Q759 2223 aa23.34■■□□□ 1.33
GTF2F1-204ENST00000594965 CCDC163A0A0D9SF12 145 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 FOXN3O00409 490 aaPredicted RBP23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 FBXO21O94952 628 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 MBD3O95983 291 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 LTFP02788 710 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 FYNP06241 537 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 CISD3P0C7P0 127 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 HNRNPLP14866 589 aaKnown RBP eCLIP23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 EEF1GP26641 437 aaKnown RBP23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 CNR2P34972 360 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 TIE1P35590 1138 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 SCUBE3Q8IX30 993 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 FAM217AQ8IXS0 508 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 ALLCQ8N6M5 410 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 TERB1Q8NA31 727 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 IL17RCQ8NAC3 791 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 STK32AQ8WU08 396 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 RNF139Q8WU17 664 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 ZDHHC4Q9NPG8 344 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 DNAJC17Q9NVM6 304 aaKnown RBP23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 TAB2Q9NYJ8 693 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 PLK2Q9NYY3 685 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 MMP17Q9ULZ9 603 aa23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 HBS1LQ9Y450 684 aaKnown RBP23.33■■□□□ 1.33
GTF2F1-204ENST00000594965 RALGAPA1Q6GYQ0 2036 aa23.33■■□□□ 1.32
GTF2F1-204ENST00000594965 TBC1D3BA6NDS4 549 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 MSI1O43347 362 aaKnown RBP23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 PNMA6AP0CW24 399 aaPredicted RBP23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 CLCN1P35523 988 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 SIM2Q14190 667 aaPredicted RBP23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 LPAL2Q16609 132 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 FYB2Q5VWT5 728 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 SMYD5Q6GMV2 418 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 TOGARAM2Q6ZUX3 1019 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 WDTC1Q8N5D0 677 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 XPO6Q96QU8 1125 aaKnown RBP23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 ST7Q9NRC1 585 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 FBXO10Q9UK96 956 aa23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 PTPRZ1P23471 2315 aaPredicted RBP23.32■■□□□ 1.32
GTF2F1-204ENST00000594965 SGK1O00141 431 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 ADAM23O75077 832 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 KLF8O95600 359 aaPredicted RBP23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 PENKP01210 267 aaPredicted RBP23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 CHKAP35790 457 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 CCDC183Q5T5S1 534 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 KLHDC7AQ5VTJ3 777 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 GRAMD4Q6IC98 578 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 SASS6Q6UVJ0 657 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 TMEM92Q6UXU6 159 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 PRR23BQ6ZRT6 265 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 TMEM110Q86TL2 294 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 CPXM2Q8N436 756 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 TXNDC5Q8NBS9 432 aaKnown RBP23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 BHMTQ93088 406 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 TMEM63CQ9P1W3 806 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 TJP2Q9UDY2 1190 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 EBF1Q9UH73 591 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 PCDHGC3Q9UN70 934 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 FHOD1Q9Y613 1164 aa23.31■■□□□ 1.32
GTF2F1-204ENST00000594965 E5RJQ4 531 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 PAPSS1O43252 624 aaPredicted RBP23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 APBB3O95704 486 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 IGLV3-27P01718 113 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 ACADSBP45954 432 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 KRT31Q15323 416 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 CRY1Q16526 586 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 PREPLQ4J6C6 727 aaPredicted RBP23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 C10orf76Q5T2E6 689 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 SLC47A2Q86VL8 602 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 FAM71AQ8IYT1 594 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 GAB3Q8WWW8 586 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 NAA15Q9BXJ9 866 aaKnown RBP23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 FANCLQ9NW38 375 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 NCDNQ9UBB6 729 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 STARD13Q9Y3M8 1113 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 GPR179Q6PRD1 2367 aa23.3■■□□□ 1.32
GTF2F1-204ENST00000594965 PRRT4C9JH25 899 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 PES1O00541 588 aaKnown RBP23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 AXIN1O15169 862 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 DGKGP49619 791 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 PDCLQ13371 301 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 DRAP1Q14919 205 aaPredicted RBP23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 STX1AQ16623 288 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 HSF5Q4G112 596 aaPredicted RBP23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 RASSF3Q86WH2 238 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 KCNV2Q8TDN2 545 aa23.29■■□□□ 1.32
GTF2F1-204ENST00000594965 HINFPQ9BQA5 517 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms