RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LSM7Q9UK45 103 aaKnown RBP20.43■□□□□ 0.86
CIRBP-220ENST00000588917 ZNF510Q9Y2H8 683 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 SH3BP1Q9Y3L3 701 aa20.43■□□□□ 0.86
CIRBP-220ENST00000588917 SLC12A8A0AV02 714 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 E2F8A0AVK6 867 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SLC9A3R1O14745 358 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-220ENST00000588917 GRAP2O75791 330 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 PRAMEF12O95522 483 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 F9P00740 461 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 H2AFZP0C0S5 128 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 RRM1P23921 792 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 MTA1Q13330 715 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 ARHGAP29Q52LW3 1261 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 PLEKHA7Q6IQ23 1121 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 DCUN1D2Q6PH85 259 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 H2AFVQ71UI9 128 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 UNC45BQ8IWX7 931 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SLC44A3Q8N4M1 653 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 PLD4Q96BZ4 506 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 ZNF653Q96CK0 615 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 PIWIL1Q96J94 861 aaKnown RBP20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SMG9Q9H0W8 520 aaKnown RBP20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SMOC2Q9H3U7 446 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 GKN1Q9NS71 199 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 SMPD4Q9NXE4 827 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 TBC1D14Q9P2M4 693 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 CCL26Q9Y258 94 aa20.42■□□□□ 0.86
CIRBP-220ENST00000588917 EPN1Q9Y6I3 576 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-220ENST00000588917 DOCK6Q96HP0 2047 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 FAM170AA1A519 330 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 LCA5LO95447 670 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 PDGFRAP16234 1089 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 HARS2P49590 506 aaKnown RBP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 NHLH1Q02575 133 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 RING1Q06587 406 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 FCHO2Q0JRZ9 810 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 TRIP4Q15650 581 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 SLC25A52Q3SY17 297 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 VITQ6UXI7 678 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 TRIM67Q6ZTA4 783 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 HTR3DQ70Z44 454 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 SND1Q7KZF4 910 aaKnown RBP eCLIP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 BMP8AQ7Z5Y6 402 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 CCDC112Q8NEF3 446 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 DQX1Q8TE96 717 aaKnown RBP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 CTNNBL1Q8WYA6 563 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 NT5C3BQ969T7 300 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 KXD1Q9BQD3 176 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 METTL5Q9NRN9 209 aaKnown RBP20.41■□□□□ 0.86
CIRBP-220ENST00000588917 SFMBT1Q9UHJ3 866 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 INTUQ9ULD6 942 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 NENFQ9UMX5 172 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 SORCS3Q9UPU3 1222 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 TLR6Q9Y2C9 796 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 PAXBP1Q9Y5B6 917 aa20.41■□□□□ 0.86
CIRBP-220ENST00000588917 TCRBV5S1A1TA0A578 114 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 EIF3CLB5ME19 914 aaKnown RBP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 ZNF263O14978 683 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 MDM4O15151 490 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 CHADO15335 359 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 TRUB2O95900 331 aaKnown RBP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 SLC2A3P11169 496 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 ABCB4P21439 1286 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 SDC4P31431 198 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 GALCP54803 685 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 MAMLD1Q13495 774 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 MTF1Q14872 753 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 ZNF77Q15935 545 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 PHLDB2Q86SQ0 1253 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 IRF7Q92985 503 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 OTUB2Q96DC9 234 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 PGAP3Q96FM1 320 aaPredicted RBP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 ZFRQ96KR1 1074 aaKnown RBP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 EIF3CQ99613 913 aaKnown RBP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.4■□□□□ 0.86
CIRBP-220ENST00000588917 CFAP97Q9P2B7 532 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 SLC12A6Q9UHW9 1150 aa20.4■□□□□ 0.86
CIRBP-220ENST00000588917 TMEM221A6NGB7 291 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 M0R296 226 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 NDUFA10O95299 355 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 TMEM253P0C7T8 217 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 RFC1P35251 1148 aaPredicted RBP20.39■□□□□ 0.85
CIRBP-220ENST00000588917 MAGEA1P43355 309 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 PTPN9P43378 593 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 TBX4P57082 545 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 KRT83P78385 493 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 ZXDAP98168 799 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 ZXDBP98169 803 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 USP4Q13107 963 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 PPP1R15BQ5SWA1 713 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 NUGGCQ68CJ6 796 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 TXLNBQ8N3L3 684 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 TTC16Q8NEE8 873 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 RXFP2Q8WXD0 754 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 RSAD2Q8WXG1 361 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 AZIN2Q96A70 460 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 PBXIP1Q96AQ6 731 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 NPY6RQ99463 290 aa20.39■□□□□ 0.85
CIRBP-220ENST00000588917 RPP25Q9BUL9 199 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms