RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, human

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF12A-203	ENST00000571351	PRKD2	Q9BZL6	878 aa		21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	TLR8	Q9NR97	1041 aa	Known RBP	21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	DDX56	Q9NY93	547 aa	Known RBP	21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	CLIC5	Q9NZA1	410 aa		21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	DNMT3B	Q9UBC3	853 aa	Known RBP	21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	DPP7	Q9UHL4	492 aa		21.34	■■□□□ 1.01
TNFRSF12A-203	ENST00000571351	UQCRHL	A0A096LP55	91 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CCDC195	A0A1B0GUA6	201 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	UQCRH	P07919	91 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PYGM	P11217	842 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TCF4	P15884	667 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CCR2	P41597	374 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	EPHA5	P54756	1037 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ATP11A	P98196	1134 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SLC25A52	Q3SY17	297 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	BTBD8	Q5XKL5	378 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	EXD1	Q8NHP7	514 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CENPI	Q92674	756 aa	Predicted RBP	21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TBCB	Q99426	244 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	UNC80	Q8N2C7	3258 aa		21.33	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CAPN9	O14815	690 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	KRT7	P08729	469 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	POU2F2	P09086	479 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	RARG	P13631	454 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PSEN1	P49768	467 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ZNF211	Q13398	564 aa	Predicted RBP	21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ARHGAP18	Q8N392	663 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PDZD8	Q8NEN9	1154 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ADAM32	Q8TC27	787 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	DQX1	Q8TE96	717 aa	Known RBP	21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CASP10	Q92851	521 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CORO1B	Q9BR76	489 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CCSER2	Q9H7U1	834 aa		21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	UXT	Q9UBK9	157 aa	Predicted RBP	21.32	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TBX18	O95935	607 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	IGLV3-25	P01717	112 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SSR1	P43307	286 aa	Known RBP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ATXN1	P54253	815 aa	Known RBP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	HDAC4	P56524	1084 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ADAM15	Q13444	863 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	EIF4EBP2	Q13542	120 aa	Predicted RBP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CDO1	Q16878	200 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TMC5	Q6UXY8	1006 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	STRADA	Q7RTN6	431 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ELMOD1	Q8N336	334 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TRIM62	Q9BVG3	475 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SMARCAL1	Q9NZC9	954 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ENDOD1	O94919	500 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ZRANB2	O95218	330 aa	Known RBP eCLIP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	FGG	P02679	453 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	GABRR2	P28476	465 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MIP	P30301	263 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SULT1E1	P49888	294 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CTC1	Q2NKJ3	1217 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MSANTD2	Q6P1R3	559 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SYCE2	Q6PIF2	218 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TAC4	Q86UU9	113 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	RCOR2	Q8IZ40	523 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ZNF276	Q8N554	614 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CMAS	Q8NFW8	434 aa	Predicted RBP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	FAM172A	Q8WUF8	416 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	UBXN4	Q92575	508 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	RBM41	Q96IZ5	413 aa	Known RBP	21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SFXN1	Q9H9B4	322 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	ASAH2	Q9NR71	780 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	RRN3	Q9NYV6	651 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TRPM5	Q9NZQ8	1165 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	STAP1	Q9ULZ2	295 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	USP18	Q9UMW8	372 aa		21.31	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TLR5	O60602	858 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MOSPD3	O75425	235 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TRUB2	O95900	331 aa	Known RBP	21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PTPN2	P17706	415 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	COPS2	P61201	443 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	NTHL1	P78549	312 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	COL19A1	Q14993	1142 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SLC5A9	Q2M3M2	681 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351		Q7L0L9	218 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MMGT1	Q8N4V1	131 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	TCEAL4	Q96EI5	215 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SMOC2	Q9H3U7	446 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	DZANK1	Q9NVP4	752 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CLEC1B	Q9P126	229 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	SFMBT1	Q9UHJ3	866 aa		21.3	■■□□□ 1
TNFRSF12A-203	ENST00000571351	C2orf78	A6NCI8	922 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	CCDC188	H7C350	402 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351		M0QYT0	321 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MDM4	O15151	490 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	XYLB	O75191	536 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	OAS1	P00973	400 aa	Known RBP	21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	RHO	P08100	348 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	MYL4	P12829	197 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	GJA1	P17302	382 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	IGFBP4	P22692	258 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	IL1R2	P27930	398 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PTPN7	P35236	360 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	PPP3CC	P48454	512 aa		21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	DLX2	Q07687	328 aa	Predicted RBP	21.29	■■□□□ 1
TNFRSF12A-203	ENST00000571351	LONRF2	Q1L5Z9	754 aa		21.29	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms