RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 RAD23BP54727 409 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 ZNF33AQ06730 810 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 ADAM9Q13443 819 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 NFIL3Q16649 462 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 GEN1Q17RS7 908 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 FYB2Q5VWT5 728 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 KRBA2Q6ZNG9 492 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 CCDC186Q7Z3E2 898 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 KCNV2Q8TDN2 545 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 HEXIM2Q96MH2 286 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 CAPN10Q9HC96 672 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 DNMT3LQ9UJW3 386 aa12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 MUC22E2RYF6 1773 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-212ENST00000551111 ZFYVE26Q68DK2 2539 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 PROS1P07225 676 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 TMEM215Q68D42 235 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 KLHDC10Q6PID8 442 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 INTS8Q75QN2 995 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 BHLHA9Q7RTU4 235 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 PIGZQ86VD9 579 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 TRIML1Q8N9V2 468 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 SORCS1Q8WY21 1168 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 ERCC4Q92889 916 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 HSPA12BQ96MM6 686 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 CAMK1GQ96NX5 476 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 XPO6Q96QU8 1125 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 GTPBP2Q9BX10 602 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 NUSAP1Q9BXS6 441 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 CISHQ9NSE2 258 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 WDR35Q9P2L0 1181 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 RASAL2Q9UJF2 1139 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 LSM7Q9UK45 103 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 PCDHA5Q9Y5H7 936 aa12.14□□□□□ -0.47
PRPF40B-212ENST00000551111 FAM208BQ5VWN6 2430 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 GOLGA4Q13439 2230 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 AP5Z1O43299 807 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 GABBR2O75899 941 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF202O95125 648 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PENKP01210 267 aaPredicted RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 KRT13P13646 458 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 CORO1AP31146 461 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 IL12RB1P42701 662 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PMS1P54277 932 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 MFAP3P55082 362 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 LMAN2Q12907 356 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 SEMA3BQ13214 749 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PNOCQ13519 176 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 DUOXA1Q1HG43 343 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 FUT11Q495W5 492 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 CBWD6Q4V339 395 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 RAB41Q5JT25 222 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 TRMT11Q7Z4G4 463 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 DENND1CQ8IV53 801 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 GATA6Q92908 595 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 IMPG2Q9BZV3 1241 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 MKRN2Q9H000 416 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 AGO1Q9UL18 857 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 ZMIZ1Q9ULJ6 1067 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 SLC6A14Q9UN76 642 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 STON1Q9Y6Q2 735 aa12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 DSPP15924 2871 aaKnown RBP12.13□□□□□ -0.47
PRPF40B-212ENST00000551111 PLXNA2O75051 1894 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 FREM2Q5SZK8 3169 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 CALCAP01258 141 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 MYL1P05976 194 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 SERPINF2P08697 491 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 CD59P13987 128 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 PRCPP42785 496 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 KRT85P78386 507 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 KRT39Q6A163 491 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 KIAA1324Q6UXG2 1013 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 CACUL1Q86Y37 369 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 MINDY1Q8N5J2 469 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 TMEM176AQ96HP8 235 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 PIWIL1Q96J94 861 aaKnown RBP12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
PRPF40B-212ENST00000551111 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms