RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CDHR3Q6ZTQ4 885 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 GALNT15Q8N3T1 639 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 LHX5Q9H2C1 402 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PCSK1NQ9UHG2 260 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 WDR81Q562E7 1941 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 A6NJR5 290 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 CHADO15335 359 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 MSCO60682 206 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 ENO1P06733 434 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 SNRPAP09012 282 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 NRLP54845 237 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 NKX3-2P78367 333 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 GSTA3Q16772 222 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 DUOXA2Q1HG44 320 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 C6orf163Q5TEZ5 329 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 ZPBP2Q6X784 338 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 SCARA5Q6ZMJ2 495 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 NET1Q7Z628 596 aaPredicted RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 CTAGE3PQ8IX95 158 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 EMC1Q8N766 993 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 ZFAND2BQ8WV99 257 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 HSPH1Q92598 858 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 GATA6Q92908 595 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 DEFB118Q96PH6 123 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PCYT2Q99447 389 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 CALN1Q9BXU9 219 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 WWP1Q9H0M0 922 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 RSAD1Q9HA92 442 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PIDD1Q9HB75 910 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 ZNF302Q9NR11 478 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 WDR35Q9P2L0 1181 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PPARGC1AQ9UBK2 798 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 TJP2Q9UDY2 1190 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PLLPQ9Y342 182 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
DDB1-224ENST00000545894 MAFBQ9Y5Q3 323 aaPredicted RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.9□□□□□ -0.5
DDB1-224ENST00000545894 MYH9P35579 1960 aaKnown RBP11.9□□□□□ -0.51
DDB1-224ENST00000545894 MED7O43513 233 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 CIB2O75838 187 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 MMP3P08254 477 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 CD19P15391 556 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 MIPP30301 263 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 ASPAP45381 313 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TMPRSS15P98073 1019 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 BST1Q10588 318 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 CBLBQ13191 982 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 NOMO1Q15155 1222 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TRMT5Q32P41 509 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 PRPF39Q86UA1 669 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 SCUBE1Q8IWY4 988 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 KBTBD2Q8IY47 623 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 KLHDC9Q8NEP7 349 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 E2F7Q96AV8 911 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 FAF2Q96CS3 445 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TAGLN3Q9UI15 199 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 CYTH4Q9UIA0 394 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 SIP14410 1827 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 IGKV6D-21A0A0A0MT36 114 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 SPECC1L-ADORA2AF8WAN1 911 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 FAM189A1O60320 539 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 AVILO75366 819 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TM7SF2O76062 418 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 RNF8O76064 485 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 C1QAP02745 245 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 HOXD8P13378 290 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 CDK18Q07002 472 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 CAPSQ13938 189 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 TAF5Q15542 800 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 DNAL1Q4LDG9 190 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 RFX8Q6ZV50 586 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 ARID3BQ8IVW6 561 aaPredicted RBP11.89□□□□□ -0.51
DDB1-224ENST00000545894 APBB2Q92870 758 aa11.89□□□□□ -0.51
DDB1-224ENST00000545894 ACAP3Q96P50 834 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms