RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 MMRN1Q13201 1228 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 BEND5Q7L4P6 421 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 SPATA4Q8NEY3 305 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 CARD9Q9H257 536 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 COMMD8Q9NX08 183 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 MTMR10Q9NXD2 777 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 HCFC2Q9Y5Z7 792 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 GREB1Q4ZG55 1949 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 C2orf78A6NCI8 922 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 F11P03951 625 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 KRT1P04264 644 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 KRT10P13645 584 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 RDXP35241 583 aaKnown RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 GAREM2Q75VX8 874 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 TMC8Q8IU68 726 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 NOA1Q8NC60 698 aaKnown RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 ACTRT1Q8TDG2 376 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 PGAP3Q96FM1 320 aaPredicted RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 ZNF512Q96ME7 567 aaPredicted RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 HEMGNQ9BXL5 484 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■□□□□ 8.8
XRCC1-202ENST00000543982 XPO7Q9UIA9 1087 aaKnown RBP16.6■□□□□ 0.25
XRCC1-202ENST00000543982 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
XRCC1-202ENST00000543982 PRPSAP2O60256 369 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 GJA1P17302 382 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 IL4RP24394 825 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 CCR2P41597 374 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 NRIP1P48552 1158 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 EFEMP1Q12805 493 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 ARTNQ5T4W7 220 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 C12orf76Q8N812 135 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-202ENST00000543982 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
XRCC1-202ENST00000543982 CEP295NLQ96MC4 621 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 RNF38Q9H0F5 515 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 SMOC2Q9H3U7 446 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 FAM204AQ9H8W3 233 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
XRCC1-202ENST00000543982 CLIC5Q9NZA1 410 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 FZD10Q9ULW2 581 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 STAP1Q9ULZ2 295 aa16.59■□□□□ 0.25
XRCC1-202ENST00000543982 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
XRCC1-202ENST00000543982 LRRD1A4D1F6 860 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 FAM72CH0Y354 149 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 IRAK2O43187 625 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 ZRANB2O95218 330 aaKnown RBP eCLIP16.58■□□□□ 0.25
XRCC1-202ENST00000543982 FGGP02679 453 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 KDELR1P24390 212 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 GGCXP38435 758 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 CXCR3P49682 368 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 HADHQ16836 314 aaKnown RBP16.58■□□□□ 0.25
XRCC1-202ENST00000543982 FAM72AQ5TYM5 149 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 FAM72DQ6L9T8 149 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 POTEHQ6S545 545 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 CCDC149Q6ZUS6 474 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 POLNQ7Z5Q5 900 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 FAM72BQ86X60 149 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 SLC22A12Q96S37 553 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 CYP2S1Q96SQ9 504 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 AP1M1Q9BXS5 423 aa16.58■□□□□ 0.25
XRCC1-202ENST00000543982 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.58■□□□□ 0.25
XRCC1-202ENST00000543982 COCHO43405 550 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 TLR5O60602 858 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 ZMYND10O75800 440 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 RALAP11233 206 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 CDKN2BP42772 138 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 NTHL1P78549 312 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 KCNC3Q14003 757 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 VEPH1Q14D04 833 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.24
XRCC1-202ENST00000543982 DUSP6Q16828 381 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 C10orf120Q5SQS8 335 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 ZFYVE27Q5T4F4 411 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 SNX30Q5VWJ9 437 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 PDE12Q6L8Q7 609 aaKnown RBP16.58■□□□□ 0.24
XRCC1-202ENST00000543982 MIB1Q86YT6 1006 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 EXD1Q8NHP7 514 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 RNF139Q8WU17 664 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 WBP2Q969T9 261 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 KCTD15Q96SI1 283 aaPredicted RBP16.58■□□□□ 0.24
XRCC1-202ENST00000543982 TLE6Q9H808 572 aa16.58■□□□□ 0.24
XRCC1-202ENST00000543982 DNMT3BQ9UBC3 853 aaKnown RBP16.58■□□□□ 0.24
XRCC1-202ENST00000543982 LRG1P02750 347 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 L1CAMP32004 1257 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 ADRA1BP35368 520 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 MRPS25P82663 173 aaKnown RBP16.57■□□□□ 0.24
XRCC1-202ENST00000543982 C2orf54Q08AI8 447 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 TAF12Q16514 161 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 PPM1LQ5SGD2 360 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 STXBP5Q5T5C0 1151 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 ERMARDQ5T6L9 678 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 SPOCD1Q6ZMY3 1216 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 RCOR2Q8IZ40 523 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 ARHGAP18Q8N392 663 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 MMGT1Q8N4V1 131 aa16.57■□□□□ 0.24
XRCC1-202ENST00000543982 ZNF707Q96C28 371 aaPredicted RBP16.57■□□□□ 0.24
XRCC1-202ENST00000543982 TCEAL4Q96EI5 215 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms