RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 MCPH1Q8NEM0 835 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 OR2I1PQ8NGU4 316 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 SETD7Q8WTS6 366 aaKnown RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 FNBP1Q96RU3 617 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 HNRNPABQ99729 332 aaKnown RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 NAP1L4Q99733 375 aaKnown RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 SLC46A2Q9BY10 475 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 LSG1Q9H089 658 aaKnown RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 CLMPQ9H6B4 373 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 ECT2Q9H8V3 914 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 ANO2Q9NQ90 1003 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 TDP1Q9NUW8 608 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 DUS2Q9NX74 493 aaKnown RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 KIAA1522Q9P206 1035 aaPredicted RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 DKK4Q9UBT3 224 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 PILRBQ9UKJ0 227 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 MMP17Q9ULZ9 603 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 TBX20Q9UMR3 447 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 CABIN1Q9Y6J0 2220 aa5.88□□□□□ -1.47
CHKA-204ENST00000528235 COL5A1P20908 1838 aaPredicted RBP5.88□□□□□ -1.47
CHKA-204ENST00000528235 PTPRQQ9UMZ3 2332 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 CFAP46Q8IYW2 2715 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 MTMR11A4FU01 709 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 OR6C75A6NL08 312 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 GOLGA6L6A8MZA4 724 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 H0YHG0 523 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 PEX14O75381 377 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SOAT2O75908 522 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 IGHDP01880 384 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 GCFC2P16383 781 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 DDX6P26196 483 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHKA-204ENST00000528235 HSPA4P34932 840 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 TUFMP49411 452 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 RARRES1P49788 294 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 NAP1L1P55209 391 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 MRPS21P82921 87 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 CFHR1Q03591 330 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 ZNF33AQ06730 810 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SSRP1Q08945 709 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 TMED1Q13445 227 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 PPP2R5AQ15172 486 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 PLEKHG6Q3KR16 790 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 MGAT5BQ3V5L5 792 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 CENPPQ6IPU0 288 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 DSTYKQ6XUX3 929 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SLC36A4Q6YBV0 504 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 NEK8Q86SG6 692 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SLCO6A1Q86UG4 719 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 FRMD1Q8N878 549 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 ATAD1Q8NBU5 361 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 DAGLBQ8NCG7 672 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 BEST2Q8NFU1 509 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 OLIG1Q8TAK6 271 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 PIGOQ8TEQ8 1089 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 USP33Q8TEY7 942 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 FBLIM1Q8WUP2 373 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 HMGB4Q8WW32 186 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SREK1Q8WXA9 508 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 MRPS31Q92665 395 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 USP13Q92995 863 aaPredicted RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 ATP2A3Q93084 1043 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SYAP1Q96A49 352 aaPredicted RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 IFT74Q96LB3 600 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 ACAP3Q96P50 834 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 SEPT5Q99719 369 aaPredicted RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 ARPC5LQ9BPX5 153 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 EIF2AK1Q9BQI3 630 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 TCHPQ9BT92 498 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 KCNMB3Q9NPA1 279 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 GPRC5CQ9NQ84 441 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 ADGRE2Q9UHX3 823 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 PCDHA12Q9UN75 941 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 CCL26Q9Y258 94 aa5.87□□□□□ -1.47
CHKA-204ENST00000528235 TIMM13Q9Y5L4 95 aaPredicted RBP5.87□□□□□ -1.47
CHKA-204ENST00000528235 A0A087WWV3 80 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 K7ERI5 159 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 RRP8O43159 456 aaKnown RBP5.86□□□□□ -1.47
CHKA-204ENST00000528235 PPFIA2O75334 1257 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 OAZ2O95190 189 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 LYPLA2O95372 231 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 CYP11A1P05108 521 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 XRCC6P12956 609 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHKA-204ENST00000528235 DRD2P14416 443 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 GNSP15586 552 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 IFNAR1P17181 557 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 PAX3P23760 479 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 NAMPTP43490 491 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 EFNA5P52803 228 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 KRT32Q14532 448 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 MTF1Q14872 753 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 SF3A1Q15459 793 aaKnown RBP5.86□□□□□ -1.47
CHKA-204ENST00000528235 ZNF568Q3ZCX4 644 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 TAF1BQ53T94 588 aaPredicted RBP5.86□□□□□ -1.47
CHKA-204ENST00000528235 EOGTQ5NDL2 527 aa5.86□□□□□ -1.47
CHKA-204ENST00000528235 PEAR1Q5VY43 1037 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms