RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 P2RY11Q96G91 374 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 FIZ1Q96SL8 496 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 REEP2Q9BRK0 252 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 DPH1Q9BZG8 443 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 ITGA11Q9UKX5 1188 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 SLC27A6Q9Y2P4 619 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 PCDHB1Q9Y5F3 818 aa14.69□□□□□ -0.06
NKX3-1-202ENST00000523261 PLXNA2O75051 1894 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 K7ENP7 123 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 DXOO77932 396 aaKnown RBP14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 SEMA4FO95754 770 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 PRKCHP24723 683 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 TRAPPC10P48553 1259 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 C21orf59P57076 290 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 RBP5P82980 135 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 INO80CQ6PI98 192 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 KDM7AQ6ZMT4 941 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 NUP93Q8N1F7 819 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 EXD3Q8N9H8 876 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 BHMTQ93088 406 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 GTF3C6Q969F1 213 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 PLIN2Q99541 437 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 ACE2Q9BYF1 805 aaPredicted RBP14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 IKZF4Q9H2S9 585 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 PLK2Q9NYY3 685 aa14.68□□□□□ -0.06
NKX3-1-202ENST00000523261 FSBPO95073 299 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 RTN3O95197 1032 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 MPOP05164 745 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 KRT19P08727 400 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ZDHHC11BP0C7U3 371 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 C7P10643 843 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 CKMT2P17540 419 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 WARSP23381 471 aaKnown RBP14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 MFAP3P55082 362 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 CDH8P55286 799 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ERVPABLB-1P60509 514 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 RACK1P63244 317 aaKnown RBP14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ZNF234Q14588 700 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 GEN1Q17RS7 908 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 C6orf132Q5T0Z8 1188 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ATG14Q6ZNE5 492 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 BRSK2Q8IWQ3 736 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 KCTD17Q8N5Z5 321 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 CACTINQ8WUQ7 758 aaKnown RBP14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 POMGNT1Q8WZA1 660 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ZNF518BQ9C0D4 1074 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 LHX5Q9H2C1 402 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 FOXP1Q9H334 677 aaPredicted RBP14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 PARVGQ9HBI0 331 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 ADAMTS1Q9UHI8 967 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 NME7Q9Y5B8 376 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 CREBBPQ92793 2442 aa14.67□□□□□ -0.06
NKX3-1-202ENST00000523261 YKT6O15498 198 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 FAM13AO94988 1023 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 MT-CO3P00414 261 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 WNT1P04628 370 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 EPHX1P07099 455 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 EPHA8P29322 1005 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 BCAT1P54687 386 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 GABREP78334 506 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 NFKB2Q00653 900 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 ME3Q16798 604 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 SFMBT2Q5VUG0 894 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 HS2ST1Q7LGA3 356 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 LSMEM2Q8N112 164 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 RBBP8NLQ8NC74 664 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 ZSWIM2Q8NEG5 633 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 OR2T3Q8NH03 318 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 SCAMP5Q8TAC9 235 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 UCMAQ8WVF2 138 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 KLF16Q9BXK1 252 aaPredicted RBP14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 ELOVL4Q9GZR5 314 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 BTBD1Q9H0C5 482 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 IL37Q9NZH6 218 aa14.66□□□□□ -0.06
NKX3-1-202ENST00000523261 TULP1O00294 542 aaPredicted RBP14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 AFPP02771 609 aaKnown RBP14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 IGHV4-34P06331 123 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 ACP1P24666 158 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 ABCD1P33897 745 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 PRPHP41219 470 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 PGFP49763 221 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 GRIN1Q05586 938 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 CAMK2GQ13555 558 aaPredicted RBP14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 UBAP2LQ14157 1087 aaKnown RBP14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 SLC6A18Q96N87 628 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 FAM213AQ9BRX8 229 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 MTMR12Q9C0I1 747 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 NACA2Q9H009 215 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 ASCL3Q9NQ33 180 aa14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 LSM7Q9UK45 103 aaKnown RBP14.65□□□□□ -0.06
NKX3-1-202ENST00000523261 FAM92AA1XBS5 289 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 CLDN5O00501 218 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 SUV39H1O43463 412 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 TLR5O60602 858 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 TBX18O95935 607 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 LSSP48449 732 aa14.64□□□□□ -0.07
NKX3-1-202ENST00000523261 TOB1P50616 345 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms