RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CCND1P24385 295 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 MAPK1P28482 360 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 TTKP33981 857 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KRT2P35908 639 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 NUDT1P36639 197 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RFC5P40937 340 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PPP1R2P41236 205 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 MLLT3P42568 568 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ACLYP53396 1101 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ADARP55265 1226 aaKnown RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 POLE2P56282 527 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 HPCAP84074 193 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF543Q08ER8 600 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 C19orf57Q0VDD7 668 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 HNRNPDQ14103 355 aaKnown RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 DMC1Q14565 340 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 AANATQ16613 207 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 P3H1Q32P28 736 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 TRIM60Q495X7 471 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 LACTB2Q53H82 288 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RTP2Q5QGT7 225 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PRAMEF19Q5SWL8 479 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ANXA8L1Q5VT79 327 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 TCERG1LQ5VWI1 586 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 METTL21CQ5VZV1 264 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 FAM109BQ6ICB4 259 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RETSATQ6NUM9 610 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PPP1R2P3Q6NXS1 205 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ERICH5Q6P6B1 374 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 C4orf22Q6V702 233 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RGS9BPQ6ZS82 235 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KCTD1Q719H9 257 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ASPGQ86U10 573 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KIRREL3Q8IZU9 778 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 NIPA2Q8N8Q9 360 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PPFIBP2Q8ND30 876 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KLHDC9Q8NEP7 349 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 DNERQ8NFT8 737 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OR56B2PQ8NGI1 322 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 SPPL3Q8TCT6 385 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RASSF5Q8WWW0 418 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 CFAP57Q96MR6 1250 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OLFM3Q96PB7 478 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 BBS4Q96RK4 519 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 PIGSQ96S52 555 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 UBAC1Q9BSL1 405 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OSBPL6Q9BZF3 934 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 NAT10Q9H0A0 1025 aaKnown RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 ZCWPW1Q9H0M4 648 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 AP5M1Q9H0R1 490 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OR51B5Q9H339 312 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KAT14Q9H8E8 782 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 KCNK13Q9HB14 408 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 C1orf112Q9NSG2 853 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OBP2AQ9NY56 170 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 CYP39A1Q9NYL5 469 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 OR6C2Q9NZP2 312 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 LARSQ9P2J5 1176 aaKnown RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 APOBEC2Q9Y235 224 aaKnown RBP7.8□□□□□ -1.16
HDAC3-216ENST00000523088 HEY1Q9Y5J3 304 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 AP1M2Q9Y6Q5 423 aa7.8□□□□□ -1.16
HDAC3-216ENST00000523088 TMEM265A0A087WTH1 108 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ESYT3A0FGR9 886 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 H3BQF6 201 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 BTN3A1O00481 513 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 KIAA0355O15063 1070 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 NKRFO15226 690 aaKnown RBP eCLIP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 FRS3O43559 492 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 DGAT1O75907 488 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ATP5HO75947 161 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 GAS8O95995 478 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PGK1P00558 417 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ITGA2BP08514 1039 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PABPC4LP0CB38 370 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CYP2A6P11509 494 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 KRT3P12035 628 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 POU2F1P14859 743 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ANPEPP15144 967 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 RAG1P15918 1043 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ATP5F1P24539 256 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TYK2P29597 1187 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TRHRP34981 398 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 HSPA9P38646 679 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 POU3F4P49335 361 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 HARS2P49590 506 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ALDH3A2P51648 485 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 AFF1P51825 1210 aaKnown RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 TNFAIP2Q03169 654 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CDC16Q13042 620 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ADAM9Q13443 819 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 PIN1Q13526 163 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-216ENST00000523088 ZNF423Q2M1K9 1284 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 MMEL1Q495T6 779 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 MINDY4Q4G0A6 757 aa7.79□□□□□ -1.16
HDAC3-216ENST00000523088 CCDC58Q4VC31 144 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms