RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 UGGT1Q9NYU2 1555 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLIT1O75093 1534 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 MED14O60244 1454 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 RALGAPBQ86X10 1494 aa5.07□□□□□ -1.6
HMGB3P13-201ENST00000511263 MROH2AA6NES4 1674 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 KDM5AP29375 1690 aaKnown RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ELP1O95163 1332 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 PTPRCP08575 1304 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC194A0A1B0GVG4 234 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 CFAP69A5D8W1 941 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ISM1B1AKI9 464 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 E9PLN8 166 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 NXPH3O95157 252 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 LMNAP02545 664 aaKnown RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 DESP17661 470 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 GCLCP48506 637 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 PXNP49023 591 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZNF132P52740 706 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 HNRNPA0Q13151 305 aaKnown RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 HLTFQ14527 1009 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 CNGA3Q16281 694 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAM153CQ494X1 144 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 SFMBT2Q5VUG0 894 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 KAZNQ674X7 775 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 DARS2Q6PI48 645 aaKnown RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 NPNTQ6UXI9 565 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPP1R32Q7Z5V6 425 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ARHGEF25Q86VW2 580 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 B4GALNT2Q8NHY0 566 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 EXOC6Q8TAG9 804 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 TTC8Q8TAM2 541 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 GIMAP1Q8WWP7 306 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ATRIPQ8WXE1 791 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 FAM136AQ96C01 138 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZG16BQ96DA0 208 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 CABS1Q96KC9 395 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 C8orf48Q96LL4 319 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC114Q96M63 670 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 PRAM1Q96QH2 718 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 VKORC1Q9BQB6 163 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 TCHPQ9BT92 498 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 PAGR1Q9BTK6 254 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 SEZ6LQ9BYH1 1024 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 LRRC27Q9C0I9 530 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 MMADHCQ9H3L0 296 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 RIOX1Q9H6W3 641 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 ANLNQ9NQW6 1124 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 SLC17A6Q9P2U8 582 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 RABL2AQ9UBK7 228 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 TPCN1Q9ULQ1 816 aa5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 YTHDC2Q9H6S0 1430 aaKnown RBP5.06□□□□□ -1.6
HMGB3P13-201ENST00000511263 E9PCH4 1651 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 RPAP1Q9BWH6 1393 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ATXN2Q99700 1313 aaKnown RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TRIM64CA6NLI5 447 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZAR1LA6NP61 321 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMEM232C9JQI7 657 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 GCOM1H8Y6P7 765 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 FRS3O43559 492 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 PRC1O43663 620 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TLR5O60602 858 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 VPS4BO75351 444 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 UNC5CO95185 931 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 MBD3O95983 291 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 IGHDP01880 384 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TUBB4AP04350 444 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 FESP07332 822 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 EZRP15311 586 aaKnown RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 KRT4P19013 534 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 CYP11B2P19099 503 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 HDCP19113 662 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 GPTP24298 496 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 MPLP40238 635 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 SOX10P56693 466 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 RBM6P78332 1123 aaKnown RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 SCAPQ12770 1279 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 E2F2Q14209 437 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 CLPPQ16740 277 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC57Q2TAC2 916 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 MGAT5BQ3V5L5 792 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TAF2Q6P1X5 1199 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 Q6ZPA2 131 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 CCDC149Q6ZUS6 474 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ARMC9Q7Z3E5 817 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TMPRSS9Q7Z410 1059 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ARHGAP22Q7Z5H3 698 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TTC30BQ8N4P2 665 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TRIML1Q8N9V2 468 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 NSUN7Q8NE18 718 aaKnown RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 NEK11Q8NG66 645 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TEKT4Q8WW24 435 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 IPCEF1Q8WWN9 437 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 PMM1Q92871 262 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 PPP1R14BQ96C90 147 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 ZMAT2Q96NC0 199 aaKnown RBP5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 SPATA5L1Q9BVQ7 753 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 B3GNT5Q9BYG0 378 aa5.05□□□□□ -1.6
HMGB3P13-201ENST00000511263 TRIM4Q9C037 500 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms