RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 TPCN1Q9ULQ1 816 aa5.52□□□□□ -1.53
LINC01088-205ENST00000509088 PHTF1Q9UMS5 762 aa5.52□□□□□ -1.53
LINC01088-205ENST00000509088 SSX2IPQ9Y2D8 614 aa5.52□□□□□ -1.53
LINC01088-205ENST00000509088 KDRP35968 1356 aa5.52□□□□□ -1.53
LINC01088-205ENST00000509088 SMARCA4P51532 1647 aa5.52□□□□□ -1.53
LINC01088-205ENST00000509088 SNAPC4Q5SXM2 1469 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ATXN2Q99700 1313 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PTPRGP23470 1445 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 M0QYG6 137 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 DNAJB5O75953 348 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PNMA6AP0CW24 399 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 GCFC2P16383 781 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 MX1P20591 662 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SERPINB3P29508 390 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 CD151P48509 253 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ALDH5A1P51649 535 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 MRPL12P52815 198 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SUMO3P55854 103 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 EEFSECP57772 596 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PICALMQ13492 652 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SLMAPQ14BN4 828 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PTPN14Q15678 1187 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TEDDM1Q5T9Z0 273 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 AWAT2Q6E213 333 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TMEM108Q6UXF1 575 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 CATSPERGQ6ZRH7 1159 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SDCCAG8Q86SQ7 713 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TADA2BQ86TJ2 420 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SESTD1Q86VW0 696 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 CHSY1Q86X52 802 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 APLFQ8IW19 511 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 FANCBQ8NB91 859 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 BICD2Q8TD16 824 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 GPT2Q8TD30 523 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SNRNP27Q8WVK2 155 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PMM1Q92871 262 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ZC3H10Q96K80 434 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 STRBPQ96SI9 672 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 WACQ9BTA9 647 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TRIM6Q9C030 488 aaPredicted RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ZNF700Q9H0M5 742 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 SMURF2Q9HAU4 748 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 PIH1D1Q9NWS0 290 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ELOVL5Q9NYP7 299 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TBC1D30Q9Y2I9 924 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ATP6V1DQ9Y5K8 247 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 ABCC2Q92887 1545 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 KDM5DQ9BY66 1539 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 BCORL1Q5H9F3 1711 aa5.51□□□□□ -1.53
LINC01088-205ENST00000509088 TCOF1Q13428 1488 aaKnown RBP5.51□□□□□ -1.53
LINC01088-205ENST00000509088 F8W8V4 182 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 MGEA5O60502 916 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 EN2P19622 333 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CYP2C18P33260 490 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 NF2P35240 595 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 PRIM2P49643 509 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 MNAT1P51948 309 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 FOXG1P55316 489 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 SLC8A3P57103 927 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CNGA2Q16280 664 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 TPD52L1Q16890 204 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 FILIP1LQ4L180 1135 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CCDC158Q5M9N0 1113 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 TREML2Q5T2D2 321 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 FBXO38Q6PIJ6 1188 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CRELD2Q6UXH1 353 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 WDR53Q7Z5U6 358 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 SKAP1Q86WV1 359 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 C8orf58Q8NAV2 365 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 MAGEC3Q8TD91 643 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 PHKBQ93100 1093 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 FSD1LQ9BXM9 530 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 DPH1Q9BZG8 443 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 LRRC27Q9C0I9 530 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 NUP62CLQ9H1M0 184 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 ZSCAN16Q9H4T2 348 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 TTC12Q9H892 705 aaPredicted RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 PRDM16Q9HAZ2 1276 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CHCHD3Q9NX63 227 aaKnown RBP5.5□□□□□ -1.53
LINC01088-205ENST00000509088 MYO6Q9UM54 1294 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 CORO2BQ9UQ03 480 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 MED16Q9Y2X0 877 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 GRIN2AQ12879 1464 aa5.5□□□□□ -1.53
LINC01088-205ENST00000509088 PIK3C2GO75747 1445 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 CHUKO15111 745 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 KPNA5O15131 536 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 SLC16A3O15427 465 aaKnown RBP5.49□□□□□ -1.53
LINC01088-205ENST00000509088 UNC5CO95185 931 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 CCDC192P0DO97 292 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 BRAFP15056 766 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 HOXB6P17509 224 aaKnown RBP5.49□□□□□ -1.53
LINC01088-205ENST00000509088 ELF1P32519 619 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 NR4A2P43354 598 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 KCNJ5P48544 419 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 ALDH9A1P49189 494 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 GSDMDP57764 484 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
LINC01088-205ENST00000509088 GRIK3Q13003 919 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
LINC01088-205ENST00000509088 SMC1AQ14683 1233 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms