RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 SERPINB11Q96P15 392 aa15.08■□□□□ 0
USP11-212ENST00000497179 NPY6RQ99463 290 aa15.08■□□□□ 0
USP11-212ENST00000497179 DDX23Q9BUQ8 820 aaKnown RBP15.08■□□□□ 0
USP11-212ENST00000497179 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
USP11-212ENST00000497179 SPTLC3Q9NUV7 552 aa15.08■□□□□ 0
USP11-212ENST00000497179 PARVAQ9NVD7 372 aa15.08■□□□□ 0
USP11-212ENST00000497179 SFMBT1Q9UHJ3 866 aa15.08■□□□□ 0
USP11-212ENST00000497179 C2CD4BA6NLJ0 364 aa15.07■□□□□ 0
USP11-212ENST00000497179 IRAK2O43187 625 aa15.07■□□□□ 0
USP11-212ENST00000497179 MSI1O43347 362 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 GREM1O60565 184 aa15.07■□□□□ 0
USP11-212ENST00000497179 STC2O76061 302 aa15.07■□□□□ 0
USP11-212ENST00000497179 LCA5LO95447 670 aa15.07■□□□□ 0
USP11-212ENST00000497179 GJB6O95452 261 aa15.07■□□□□ 0
USP11-212ENST00000497179 TRUB2O95900 331 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 IGLV3-27P01718 113 aa15.07■□□□□ 0
USP11-212ENST00000497179 IRF1P10914 325 aa15.07■□□□□ 0
USP11-212ENST00000497179 KPNA1P52294 538 aaPredicted RBP15.07■□□□□ 0
USP11-212ENST00000497179 RNASE9P60153 205 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 PITX1P78337 314 aaPredicted RBP15.07■□□□□ 0
USP11-212ENST00000497179 RING1Q06587 406 aa15.07■□□□□ 0
USP11-212ENST00000497179 EIF4EBP2Q13542 120 aaPredicted RBP15.07■□□□□ 0
USP11-212ENST00000497179 TRIP4Q15650 581 aaPredicted RBP15.07■□□□□ 0
USP11-212ENST00000497179 ARHGAP29Q52LW3 1261 aa15.07■□□□□ 0
USP11-212ENST00000497179 YAF2Q8IY57 180 aa15.07■□□□□ 0
USP11-212ENST00000497179 NT5C3BQ969T7 300 aa15.07■□□□□ 0
USP11-212ENST00000497179 WBP2Q969T9 261 aa15.07■□□□□ 0
USP11-212ENST00000497179 BAG1Q99933 345 aaPredicted RBP15.07■□□□□ 0
USP11-212ENST00000497179 TRMT61BQ9BVS5 477 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 FAM204AQ9H8W3 233 aa15.07■□□□□ 0
USP11-212ENST00000497179 THG1LQ9NWX6 298 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 CNOT8Q9UFF9 292 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 LSM7Q9UK45 103 aaKnown RBP15.07■□□□□ 0
USP11-212ENST00000497179 STAP1Q9ULZ2 295 aa15.07■□□□□ 0
USP11-212ENST00000497179 SORCS3Q9UPU3 1222 aa15.07■□□□□ 0
USP11-212ENST00000497179 SCINQ9Y6U3 715 aa15.07■□□□□ 0
USP11-212ENST00000497179 TRIOO75962 3097 aa15.07■□□□□ 0
USP11-212ENST00000497179 COL4A2P08572 1712 aa15.06■□□□□ 0
USP11-212ENST00000497179 ANKRD62A6NC57 917 aa15.06■□□□□ 0
USP11-212ENST00000497179 SOWAHDA6NJG2 315 aa15.06■□□□□ 0
USP11-212ENST00000497179 ZNF263O14978 683 aa15.06■□□□□ 0
USP11-212ENST00000497179 CHADO15335 359 aa15.06■□□□□ 0
USP11-212ENST00000497179 HMBSP08397 361 aa15.06■□□□□ 0
USP11-212ENST00000497179 SRFP11831 508 aa15.06■□□□□ 0
USP11-212ENST00000497179 ABCB4P21439 1286 aa15.06■□□□□ 0
USP11-212ENST00000497179 GDI1P31150 447 aa15.06■□□□□ 0
USP11-212ENST00000497179 RFC1P35251 1148 aaPredicted RBP15.06■□□□□ 0
USP11-212ENST00000497179 CYLC1P35663 651 aaPredicted RBP15.06■□□□□ 0
USP11-212ENST00000497179 PTPN9P43378 593 aa15.06■□□□□ 0
USP11-212ENST00000497179 SULT1E1P49888 294 aa15.06■□□□□ 0
USP11-212ENST00000497179 GALCP54803 685 aa15.06■□□□□ 0
USP11-212ENST00000497179 MAMLD1Q13495 774 aa15.06■□□□□ 0
USP11-212ENST00000497179 SLC25A52Q3SY17 297 aa15.06■□□□□ 0
USP11-212ENST00000497179 CC2D1AQ6P1N0 951 aaPredicted RBP15.06■□□□□ 0
USP11-212ENST00000497179 Q6ZNB5 142 aa15.06■□□□□ 0
USP11-212ENST00000497179 HTR3DQ70Z44 454 aa15.06■□□□□ 0
USP11-212ENST00000497179 BNIPLQ7Z465 357 aa15.06■□□□□ 0
USP11-212ENST00000497179 EMC1Q8N766 993 aa15.06■□□□□ 0
USP11-212ENST00000497179 ADAM32Q8TC27 787 aa15.06■□□□□ 0
USP11-212ENST00000497179 RXFP2Q8WXD0 754 aa15.06■□□□□ 0
USP11-212ENST00000497179 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
USP11-212ENST00000497179 PGAP3Q96FM1 320 aaPredicted RBP15.06■□□□□ 0
USP11-212ENST00000497179 ASIC4Q96FT7 647 aa15.06■□□□□ 0
USP11-212ENST00000497179 SLC39A13Q96H72 371 aa15.06■□□□□ 0
USP11-212ENST00000497179 MCEEQ96PE7 176 aa15.06■□□□□ 0
USP11-212ENST00000497179 DCLK3Q9C098 648 aa15.06■□□□□ 0
USP11-212ENST00000497179 THAP2Q9H0W7 228 aa15.06■□□□□ 0
USP11-212ENST00000497179 SLC2A4RGQ9NR83 387 aa15.06■□□□□ 0
USP11-212ENST00000497179 DUSP12Q9UNI6 340 aa15.06■□□□□ 0
USP11-212ENST00000497179 TLR6Q9Y2C9 796 aa15.06■□□□□ 0
USP11-212ENST00000497179 SH3BP1Q9Y3L3 701 aa15.06■□□□□ 0
USP11-212ENST00000497179 TTC28Q96AY4 2481 aa15.06■□□□□ 0
USP11-212ENST00000497179 EIF3CLB5ME19 914 aaKnown RBP15.05■□□□□ -0
USP11-212ENST00000497179 M0QYT0 321 aa15.05■□□□□ -0
USP11-212ENST00000497179 ARNTLO00327 626 aa15.05■□□□□ -0
USP11-212ENST00000497179 SLC9A3R1O14745 358 aaPredicted RBP15.05■□□□□ -0
USP11-212ENST00000497179 NARSO43776 548 aaKnown RBP15.05■□□□□ -0
USP11-212ENST00000497179 CYP1A2P05177 515 aa15.05■□□□□ -0
USP11-212ENST00000497179 H2AFZP0C0S5 128 aa15.05■□□□□ -0
USP11-212ENST00000497179 TMEM253P0C7T8 217 aa15.05■□□□□ -0
USP11-212ENST00000497179 PDGFRAP16234 1089 aa15.05■□□□□ -0
USP11-212ENST00000497179 GPD1P21695 349 aa15.05■□□□□ -0
USP11-212ENST00000497179 SDC4P31431 198 aa15.05■□□□□ -0
USP11-212ENST00000497179 IFNAR2P48551 515 aa15.05■□□□□ -0
USP11-212ENST00000497179 TBX4P57082 545 aa15.05■□□□□ -0
USP11-212ENST00000497179 RPL7AP62424 266 aaKnown RBP15.05■□□□□ -0
USP11-212ENST00000497179 GPC5P78333 572 aa15.05■□□□□ -0
USP11-212ENST00000497179 PDGFRLQ15198 375 aa15.05■□□□□ -0
USP11-212ENST00000497179 C10orf76Q5T2E6 689 aa15.05■□□□□ -0
USP11-212ENST00000497179 NUGGCQ68CJ6 796 aa15.05■□□□□ -0
USP11-212ENST00000497179 DCUN1D2Q6PH85 259 aa15.05■□□□□ -0
USP11-212ENST00000497179 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
USP11-212ENST00000497179 H2AFVQ71UI9 128 aa15.05■□□□□ -0
USP11-212ENST00000497179 TTC16Q8NEE8 873 aa15.05■□□□□ -0
USP11-212ENST00000497179 OSCP1Q8WVF1 389 aa15.05■□□□□ -0
USP11-212ENST00000497179 DNASE1L2Q92874 299 aa15.05■□□□□ -0
USP11-212ENST00000497179 IRF7Q92985 503 aa15.05■□□□□ -0
USP11-212ENST00000497179 ARHGEF26Q96DR7 871 aa15.05■□□□□ -0
USP11-212ENST00000497179 FCRL2Q96LA5 508 aaPredicted RBP15.05■□□□□ -0
USP11-212ENST00000497179 CFAP57Q96MR6 1250 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms