RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 SH3BP4Q9P0V3 963 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 KIF17Q9P2E2 1029 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 PACSIN3Q9UKS6 424 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 GABRQQ9UN88 632 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 DGKBQ9Y6T7 804 aa4.54□□□□□ -1.68
CLK1-213ENST00000492793 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 CCDC189A1A4V9 331 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 EFCAB8A8MWE9 144 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 M0R3H8 397 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 HNRNPCP07910 306 aaKnown RBP eCLIP4.53□□□□□ -1.68
CLK1-213ENST00000492793 SLC3A2P08195 630 aaKnown RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 ELFN1P0C7U0 828 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 MYCLP12524 364 aaPredicted RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 VEGFAP15692 232 aaPredicted RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 PCSK6P29122 969 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 THBS4P35443 961 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 DIO1P49895 249 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 PSG6Q00889 435 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 SF3A3Q12874 501 aaKnown RBP eCLIP4.53□□□□□ -1.68
CLK1-213ENST00000492793 LMAN2Q12907 356 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 PPFIA1Q13136 1202 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 CBFBQ13951 182 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 ADCK5Q3MIX3 580 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 AASDHQ4L235 1098 aaPredicted RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 C4orf46Q504U0 113 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 AARS2Q5JTZ9 985 aaKnown RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 SYNE3Q6ZMZ3 975 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 DBX2Q6ZNG2 339 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 PIK3AP1Q6ZUJ8 805 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 ANKRD18AQ8IVF6 992 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 Q8N1X5 172 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 STT3BQ8TCJ2 826 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 CSGALNACT1Q8TDX6 532 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 OTUD7AQ8TE49 926 aaPredicted RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 CPT1BQ92523 772 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 MCRS1Q96EZ8 462 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 MMS19Q96T76 1030 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 ISCA1Q9BUE6 129 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 DUSP26Q9BV47 211 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 FSD1LQ9BXM9 530 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 PABPC3Q9H361 631 aaKnown RBP4.53□□□□□ -1.68
CLK1-213ENST00000492793 SAP30LQ9HAJ7 183 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 SAYSD1Q9NPB0 183 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 ASB6Q9NWX5 421 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 FOXJ2Q9P0K8 574 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 TLK1Q9UKI8 766 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 RAB21Q9UL25 225 aa4.53□□□□□ -1.68
CLK1-213ENST00000492793 A0A087X1B8 175 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 MGST3O14880 152 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 FOXN1O15353 648 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 GCATO75600 419 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 RHOBTB3O94955 611 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 TMIGD3P0DMS9 266 aaPredicted RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 PEPDP12955 493 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 RXRAP19793 462 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 DRD4P21917 467 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 MMP8P22894 467 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 IGHMBP2P38935 993 aaKnown RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 AARSP49588 968 aaKnown RBP eCLIP4.52□□□□□ -1.69
CLK1-213ENST00000492793 RARRES1P49788 294 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 PRKAA2P54646 552 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 KLF10Q13118 480 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 CUL4BQ13620 913 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 KCNJ12Q14500 433 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 NFRKBQ6P4R8 1299 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 MTHFD1LQ6UB35 978 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 AMIGO2Q86SJ2 522 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 MRGPRGQ86SM5 289 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 TRABD2AQ86V40 505 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 ARHGEF25Q86VW2 580 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 FTSJ3Q8IY81 847 aaKnown RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 CLASRPQ8N2M8 674 aaKnown RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 PNPLA1Q8N8W4 532 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 CTHRC1Q96CG8 243 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 PRR11Q96HE9 360 aaPredicted RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 PDLIM2Q96JY6 352 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 FAR2Q96K12 515 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 MACROD1Q9BQ69 325 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 PRDM8Q9NQV8 689 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 SRP68Q9UHB9 627 aaKnown RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 DAPP1Q9UN19 280 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 C19orf53Q9UNZ5 99 aaPredicted RBP4.52□□□□□ -1.69
CLK1-213ENST00000492793 CNTN6Q9UQ52 1028 aa4.52□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3DA0A087WVF3 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3IA0A087WXS9 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3EA0A087X179 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3KA0A087X1G2 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3BA6NDS4 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3FA6NER0 549 aaPredicted RBP4.51□□□□□ -1.69
CLK1-213ENST00000492793 TBC1D3LB9A6J9 549 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 SMIM22K7EJ46 135 aa4.51□□□□□ -1.69
CLK1-213ENST00000492793 CTIFO43310 598 aaKnown RBP4.51□□□□□ -1.69
CLK1-213ENST00000492793 CBFA2T3O75081 653 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms