RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PPP6CO00743 305 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 HNRNPDLO14979 420 aaKnown RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 ZSCAN9O15535 394 aaPredicted RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 TUBB4AP04350 444 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 IFIT2P09913 472 aaKnown RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 PECAM1P16284 738 aaPredicted RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 ATF7P17544 494 aaPredicted RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 MPGP29372 298 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 PBX1P40424 430 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 HSPA7P48741 367 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 DGKQP52824 942 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 GPC5P78333 572 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 DNASE1L3Q13609 305 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 ATP1A4Q13733 1029 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 UBE4AQ14139 1066 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 LARS2Q15031 903 aaKnown RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 MAPKAPK3Q16644 382 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 MPEG1Q2M385 716 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 AASDHQ4L235 1098 aaPredicted RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 CEP78Q5JTW2 689 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 DGKKQ5KSL6 1271 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 ZNF280DQ6N043 979 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 TMEM65Q6PI78 240 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 FBXO38Q6PIJ6 1188 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 DCDC5Q6ZRR9 648 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 P3H2Q8IVL5 708 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.68□□□□□ -1.82
RBM28-207ENST00000488249 FAM71DQ8N9W8 422 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 GJA10Q969M2 543 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 KAZALD1Q96I82 304 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 C5orf34Q96MH7 638 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 HS6ST2Q96MM7 605 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 ZNF700Q9H0M5 742 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 TMX4Q9H1E5 349 aaPredicted RBP3.68□□□□□ -1.82
RBM28-207ENST00000488249 USP29Q9HBJ7 922 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 NLRC4Q9NPP4 1024 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 TM7SF3Q9NS93 570 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 FZD4Q9ULV1 537 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 PCDHGB2Q9Y5G2 931 aa3.68□□□□□ -1.82
RBM28-207ENST00000488249 CLIC1O00299 241 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 PODXLO00592 558 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 EPB41L2O43491 1005 aaKnown RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 PLA2G6O60733 806 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 PRAMEF2O60811 474 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 VIPP01282 170 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 TMIGD3P0DMS9 266 aaPredicted RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 ABCB4P21439 1286 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 EPHB2P29323 1055 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 ABCG1P45844 678 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 BTKQ06187 659 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 CCDC15Q0P6D6 951 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 LMOD3Q0VAK6 560 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 KCNJ12Q14500 433 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 KCNB1Q14721 858 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 MFSD13AQ14CX5 517 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 SRSF7Q16629 238 aaKnown RBP eCLIP3.67□□□□□ -1.825e-9■□□□□ 9.5
RBM28-207ENST00000488249 ARHGAP15Q53QZ3 475 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 TMTC4Q5T4D3 741 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 SYCP2LQ5T4T6 812 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 TLDC1Q6P9B6 456 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 VSTM1Q6UX27 236 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 ACRBPQ8NEB7 543 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 GRAMD1AQ96CP6 724 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 PRR11Q96HE9 360 aaPredicted RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 SH2D3AQ9BRG2 576 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 CINPQ9BW66 212 aaPredicted RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 QTRT1Q9BXR0 403 aaKnown RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 SAP30LQ9HAJ7 183 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 TMEM8AQ9HCN3 771 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 NECTIN3Q9NQS3 549 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 VPS45Q9NRW7 570 aa3.67□□□□□ -1.82
RBM28-207ENST00000488249 MAP3K20Q9NYL2 800 aaKnown RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 SETD1BQ9UPS6 1966 aaKnown RBP3.67□□□□□ -1.82
RBM28-207ENST00000488249 FYB1O15117 783 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 ANP32CO43423 234 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 MBPP02686 304 aaPredicted RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 PRR35P0CG20 571 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 SRGAP2BP0DMP2 458 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 DRD1P21728 446 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 GALNSP34059 522 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
RBM28-207ENST00000488249 HDAC1Q13547 482 aaPredicted RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 DHX8Q14562 1220 aaKnown RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 RAB30Q15771 203 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 EZH2Q15910 746 aaKnown RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 AWAT1Q58HT5 328 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 TMEM196Q5HYL7 178 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 ARL6IP4Q66PJ3 421 aaKnown RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 RANBP10Q6VN20 620 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 ZNF813Q6ZN06 617 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 YTHDF3Q7Z739 585 aaKnown RBP3.66□□□□□ -1.82
RBM28-207ENST00000488249 PCGF5Q86SE9 256 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 NEK8Q86SG6 692 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 GALNT16Q8N428 558 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 ZNF398Q8TD17 642 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 SLC39A13Q96H72 371 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 NUDT22Q9BRQ3 303 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 EFHD1Q9BUP0 239 aa3.66□□□□□ -1.82
RBM28-207ENST00000488249 STK33Q9BYT3 514 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms