RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 M0QYT0 321 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 NCK2O43639 380 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 MOSPD3O75425 235 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 CASQ1P31415 396 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 LTBRP36941 435 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 PTPN9P43378 593 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 PSEN1P49768 467 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 HDAC4P56524 1084 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 EFEMP1Q12805 493 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 PIGHQ14442 188 aaPredicted RBP17.6■□□□□ 0.41
NF1-211ENST00000487476 CCDC85BQ15834 202 aaPredicted RBP17.6■□□□□ 0.41
NF1-211ENST00000487476 CTC1Q2NKJ3 1217 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 C10orf120Q5SQS8 335 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 C11orf63Q6NUN7 778 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 TMCO3Q6UWJ1 677 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 SHKBP1Q8TBC3 707 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 RNF139Q8WU17 664 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 CENPIQ92674 756 aaPredicted RBP17.6■□□□□ 0.41
NF1-211ENST00000487476 TRPC7Q9HCX4 862 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 DZANK1Q9NVP4 752 aa17.6■□□□□ 0.41
NF1-211ENST00000487476 COCHO43405 550 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 LRCH4O75427 683 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 TRUB2O95900 331 aaKnown RBP17.59■□□□□ 0.41
NF1-211ENST00000487476 EPHA5P54756 1037 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 TAS2R40P59535 323 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 PABPC1LQ4VXU2 614 aaKnown RBP17.59■□□□□ 0.41
NF1-211ENST00000487476 TXNRD3NBQ6F5E7 133 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 POTEHQ6S545 545 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 BEND5Q7L4P6 421 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 DEFB123Q8N688 67 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 NIPA2Q8N8Q9 360 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 TRIM58Q8NG06 486 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 GUCD1Q96NT3 240 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 PIGVQ9NUD9 493 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 ENC1O14682 589 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 RALAP11233 206 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 HECTD3Q5T447 861 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 CC2D1AQ6P1N0 951 aaPredicted RBP17.59■□□□□ 0.41
NF1-211ENST00000487476 PDZD4Q76G19 769 aaPredicted RBP17.59■□□□□ 0.41
NF1-211ENST00000487476 BNIPLQ7Z465 357 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 NT5DC3Q86UY8 548 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 MIB1Q86YT6 1006 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 DDIT4Q9NX09 232 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 PCSK1NQ9UHG2 260 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 MRFAP1Q9Y605 127 aa17.59■□□□□ 0.41
NF1-211ENST00000487476 PAPLNO95428 1278 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 IL1R2P27930 398 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 SSR1P43307 286 aaKnown RBP17.58■□□□□ 0.4
NF1-211ENST00000487476 TEAD2Q15562 447 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 FAM131BQ86XD5 332 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 MAB21L3Q8N8X9 362 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
NF1-211ENST00000487476 ITFG1Q8TB96 612 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 ING5Q8WYH8 240 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 ALS2CR12Q96Q35 445 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 PEBP4Q96S96 227 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 TMPRSS4Q9NRS4 437 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 STAP1Q9ULZ2 295 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 SPOPO43791 374 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 OAS1P00973 400 aaKnown RBP17.58■□□□□ 0.4
NF1-211ENST00000487476 IGLV3-25P01717 112 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 POU2F2P09086 479 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 MIPP30301 263 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 MARCKSL1P49006 195 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 DNA2P51530 1060 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 CLUL1Q15846 466 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 ATP13A4Q4VNC1 1196 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 PRSS36Q5K4E3 855 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 SCYL2Q6P3W7 929 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 PEX26Q7Z412 305 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 ARL14EPQ8N8R7 260 aaPredicted RBP17.58■□□□□ 0.4
NF1-211ENST00000487476 TRIM62Q9BVG3 475 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 MAGEB5Q9BZ81 275 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 SMOC2Q9H3U7 446 aa17.58■□□□□ 0.4
NF1-211ENST00000487476 ENDOD1O94919 500 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 CDC25CP30307 473 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 MAN1A1P33908 653 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 GJC1P36383 396 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 PPP3CCP48454 512 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 DEUP1Q05D60 604 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 EIF4EBP2Q13542 120 aaPredicted RBP17.57■□□□□ 0.4
NF1-211ENST00000487476 MSANTD2Q6P1R3 559 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 GPR149Q86SP6 731 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.57■□□□□ 0.4
NF1-211ENST00000487476 KRT35Q92764 455 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 CD101Q93033 1021 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
NF1-211ENST00000487476 CALR3Q96L12 384 aaKnown RBP17.57■□□□□ 0.4
NF1-211ENST00000487476 SLC46A2Q9BY10 475 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 S1PR5Q9H228 398 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 EPC1Q9H2F5 836 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 WDR6Q9NNW5 1121 aaKnown RBP17.57■□□□□ 0.4
NF1-211ENST00000487476 ANLNQ9NQW6 1124 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.57■□□□□ 0.42e-9■■□□□ 13.3
NF1-211ENST00000487476 MARCH2Q9P0N8 246 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 RASAL2Q9UJF2 1139 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 NOTCH4Q99466 2003 aa17.57■□□□□ 0.4
NF1-211ENST00000487476 RNF8O76064 485 aa17.56■□□□□ 0.4
NF1-211ENST00000487476 SEC31AO94979 1220 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms