RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 MDM4O15151 490 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 INPPL1O15357 1258 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 RIPK2O43353 540 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 RBL1P28749 1068 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 ROR1Q01973 937 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 MTMR3Q13615 1198 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DPYSL2Q16555 572 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 RAB41Q5JT25 222 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 BSPRYQ5W0U4 402 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 HIBCHQ6NVY1 386 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 DRICH1Q6PGQ1 229 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 SYDE1Q6ZW31 735 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 MAP7D3Q8IWC1 876 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 SLC2A13Q96QE2 648 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 FTHL17Q9BXU8 183 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DMAP1Q9NPF5 467 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 FZD10Q9ULW2 581 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DRG1Q9Y295 367 aaKnown RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 MYO16Q9Y6X6 1858 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 ERICH4A6NGS2 130 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 KCNN4O15554 427 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 MSI1O43347 362 aaKnown RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 TMEM63AO94886 807 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 FAM163BP0C2L3 166 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 MYZAPP0CAP1 466 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DESP17661 470 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 SCNN1AP37088 669 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 CTCFP49711 727 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 SLC5A3P53794 718 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 GABPB1Q06547 395 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 TFDP2Q14188 446 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 PDK2Q15119 407 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 LONRF1Q17RB8 773 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 RTP2Q5QGT7 225 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 PRSS55Q6UWB4 352 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 STRADAQ7RTN6 431 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 TAC4Q86UU9 113 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 ANKMY2Q8IV38 441 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 RBM15Q96T37 977 aaKnown RBP eCLIP6.47□□□□□ -1.375e-8■■■□□ 15.1
CLK1-210ENST00000473565 TMBIM4Q9HC24 238 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 PCDH9Q9HC56 1237 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 CSNK1G1Q9HCP0 422 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 WDR6Q9NNW5 1121 aaKnown RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 SAYSD1Q9NPB0 183 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 CNGB3Q9NQW8 809 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
CLK1-210ENST00000473565 NINJ2Q9NZG7 142 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 CTNNAL1Q9UBT7 734 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 ADAM28Q9UKQ2 775 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 DSEQ9UL01 958 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 STAP1Q9ULZ2 295 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 EFR3BQ9Y2G0 817 aa6.47□□□□□ -1.37
CLK1-210ENST00000473565 FNDC1Q4ZHG4 1894 aaPredicted RBP6.47□□□□□ -1.37
CLK1-210ENST00000473565 GOLGA8KD6RF30 607 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 PITPNM1O00562 1244 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 MFSD11O43934 449 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 RARGP13631 454 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 TYMPP19971 482 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 ITGB8P26012 769 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 GBP1P32455 592 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 RDXP35241 583 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 USP46P62068 366 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 BASP1P80723 227 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 LMNB2Q03252 620 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CTXN3Q4LDR2 81 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 MSS51Q4VC12 460 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CCDC38Q502W7 563 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 RNASEH2BQ5TBB1 312 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 SLC9A4Q6AI14 798 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CCDC13Q8IYE1 715 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 TTC13Q8NBP0 860 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 FAM76AQ8TAV0 307 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CCDC110Q8TBZ0 833 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CPT1BQ92523 772 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 NT5C3BQ969T7 300 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 VWCEQ96DN2 955 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 ATP6V1G3Q96LB4 118 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 NMUR1Q9HB89 426 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 ARHGEF4Q9NR80 690 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 SFMBT1Q9UHJ3 866 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 TPX2Q9ULW0 747 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 NOVA2Q9UNW9 492 aaKnown RBP6.46□□□□□ -1.37
CLK1-210ENST00000473565 MICAL3Q7RTP6 2002 aa6.46□□□□□ -1.37
CLK1-210ENST00000473565 TANC1Q9C0D5 1861 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 C2CD2LO14523 706 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ADAM12O43184 909 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 IFI35P80217 286 aaPredicted RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 NCBP2-AS2Q69YL0 99 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 LRIG3Q6UXM1 1119 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ARCQ7LC44 396 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 DQX1Q8TE96 717 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 RNF139Q8WU17 664 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 PRCCQ92733 491 aaPredicted RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 MRRFQ96E11 262 aaKnown RBP6.46□□□□□ -1.38
CLK1-210ENST00000473565 LGMNQ99538 433 aa6.46□□□□□ -1.38
CLK1-210ENST00000473565 ZNF670Q9BS34 389 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms