RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ITIH1P19827 911 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 PRKCHP24723 683 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 CSTF2P33240 577 aaKnown RBP eCLIP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 GRM5P41594 1212 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 DGKGP49619 791 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 CDH8P55286 799 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 SMARCB1Q12824 385 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 SPIDRQ14159 915 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 INPP5JQ15735 1006 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 ZRANB3Q5FWF4 1079 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 CDCA2Q69YH5 1023 aaPredicted RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 TCTN3Q6NUS6 607 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 MAEAQ7L5Y9 396 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 B3GNT8Q7Z7M8 397 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 BBS7Q8IWZ6 715 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 OR2T3Q8NH03 318 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 TPCN2Q8NHX9 752 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 FAM174AQ8TBP5 190 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 NDRG1Q92597 394 aaKnown RBP7.03□□□□□ -1.28
HDAC3-206ENST00000471968 HDAC11Q96DB2 347 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 OTUB2Q96DC9 234 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 LXNQ9BS40 222 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 SGPP1Q9BX95 441 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 CAAP1Q9H8G2 361 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 GJB4Q9NTQ9 266 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 PCDHB5Q9Y5E4 795 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 PKDREJQ9NTG1 2253 aa7.03□□□□□ -1.28
HDAC3-206ENST00000471968 MKRN2OSH3BPM6 223 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 DUX1O43812 170 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 CACNG3O60359 315 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ABL1P00519 1130 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 DNTTP04053 509 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 TYRP14679 529 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ATP1A2P50993 1020 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ENPP2Q13822 863 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 DRAP1Q14919 205 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 NR6A1Q15406 480 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 NCEH1Q6PIU2 408 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 TMTC3Q6ZXV5 915 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 APBB1IPQ7Z5R6 666 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 C4orf19Q8IY42 314 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ADGRF2Q8IZF7 708 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 KCTD17Q8N5Z5 321 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 IL22RA1Q8N6P7 574 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 USP7Q93009 1102 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 SENP8Q96LD8 212 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 NACC1Q96RE7 527 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 BBS2Q9BXC9 721 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 TRIM8Q9BZR9 551 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 FOXP3Q9BZS1 431 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 C2orf40Q9H1Z8 148 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 SLKQ9H2G2 1235 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 C6orf50Q9HD87 102 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 TMLHEQ9NVH6 421 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 BARHL2Q9NY43 387 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 NLGN3Q9NZ94 848 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 THAP10Q9P2Z0 257 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 LRWD1Q9UFC0 647 aa7.02□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF106Q9H2Y7 1883 aaKnown RBP7.02□□□□□ -1.29
HDAC3-206ENST00000471968 DIDO1Q9BTC0 2240 aaKnown RBP7.01□□□□□ -1.29
HDAC3-206ENST00000471968 FAM221AA4D161 298 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 NPC1O15118 1278 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 EDIL3O43854 480 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 DGAT1O75907 488 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 MBL2P11226 248 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-206ENST00000471968 COX6B1P14854 86 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 BPIP17213 487 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 PFKLP17858 780 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 KLK2P20151 261 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 CAPN3P20807 821 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 CYP2F1P24903 491 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 ITGA3P26006 1051 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 HARS2P49590 506 aaKnown RBP7.01□□□□□ -1.29
HDAC3-206ENST00000471968 MAPK10P53779 464 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 PPP2R2AP63151 447 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 SPAG1Q07617 926 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 CDC20Q12834 499 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 FGL2Q14314 439 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 KCNJ12Q14500 433 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 ZNF234Q14588 700 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 TTC31Q49AM3 519 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-206ENST00000471968 NADK2Q4G0N4 442 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 PERM1Q5SV97 790 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 NT5DC1Q5TFE4 455 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 TPGS1Q6ZTW0 290 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 TGIF2LYQ8IUE0 185 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 NAGSQ8N159 534 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 REXO1Q8N1G1 1221 aaKnown RBP7.01□□□□□ -1.29
HDAC3-206ENST00000471968 IGDCC4Q8TDY8 1250 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 GANCQ8TET4 914 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 BHMTQ93088 406 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 NKD1Q969G9 470 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 STRADBQ9C0K7 418 aa7.01□□□□□ -1.29
HDAC3-206ENST00000471968 CCDC113Q9H0I3 377 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms