RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 DAOAP59103 153 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 EOGTQ5NDL2 527 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 BSPRYQ5W0U4 402 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 NUDT18Q6ZVK8 323 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 MDGA1Q8NFP4 955 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 KCNV2Q8TDN2 545 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 BHMTQ93088 406 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 LOXL4Q96JB6 756 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 TPSD1Q9BZJ3 242 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 SEMA4GQ9NTN9 838 aa19.81■□□□□ 0.76
COL5A1-203ENST00000460264 AGO1Q9UL18 857 aaKnown RBP19.81■□□□□ 0.76
COL5A1-203ENST00000460264 KRT5P13647 590 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 RSPO4Q2I0M5 234 aaPredicted RBP19.8■□□□□ 0.76
COL5A1-203ENST00000460264 PLK5Q496M5 336 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 TRIM65Q6PJ69 517 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 CLEC17AQ6ZS10 378 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 TOGARAM2Q6ZUX3 1019 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 DENND1CQ8IV53 801 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 ZNF513Q8N8E2 541 aaPredicted RBP19.8■□□□□ 0.76
COL5A1-203ENST00000460264 EDEM1Q92611 657 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 PLD4Q96BZ4 506 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 CRACR2AQ9BSW2 395 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 UBE2TQ9NPD8 197 aaPredicted RBP19.8■□□□□ 0.76
COL5A1-203ENST00000460264 DLL3Q9NYJ7 618 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 PLK2Q9NYY3 685 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 HCN2Q9UL51 889 aa19.8■□□□□ 0.76
COL5A1-203ENST00000460264 THADAQ6YHU6 1953 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 PRR5-ARHGAP8B1AHC4 643 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 PIK3R2O00459 728 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 DCLK1O15075 740 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 EPN2O95208 641 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 PENKP01210 267 aaPredicted RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 CHKAP35790 457 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 DGKGP49619 791 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 ARHGAP8P85298 464 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 TRIP4Q15650 581 aaPredicted RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 CSRP2Q16527 193 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 DPCR1Q3MIW9 517 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 TRMT11Q7Z4G4 463 aaKnown RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 CREBRFQ8IUR6 639 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 FMNL3Q8IVF7 1028 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 RNF139Q8WU17 664 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 NUP62CLQ9H1M0 184 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 DUSP15Q9H1R2 295 aaPredicted RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 ABCC13Q9NSE7 274 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 STARD13Q9Y3M8 1113 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 HBS1LQ9Y450 684 aaKnown RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.79■□□□□ 0.76
COL5A1-203ENST00000460264 NUP205Q92621 2012 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 ABCA7Q8IZY2 2146 aa19.79■□□□□ 0.76
COL5A1-203ENST00000460264 PRRT4C9JH25 899 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 ALDH1A2O94788 518 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 CISD3P0C7P0 127 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 PUM1Q14671 1186 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL5A1-203ENST00000460264 USP39Q53GS9 565 aaKnown RBP19.78■□□□□ 0.76
COL5A1-203ENST00000460264 FYB2Q5VWT5 728 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 EGFLAMQ63HQ2 1017 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 MSANTD2Q6P1R3 559 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 GBP6Q6ZN66 633 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 PRR23CQ6ZRP0 262 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 ENOSF1Q7L5Y1 443 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 ERMP1Q7Z2K6 904 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 FAM217AQ8IXS0 508 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 CPXM2Q8N436 756 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 CLEC4CQ8WTT0 213 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 IRGQQ8WZA9 623 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 HSFY1Q96LI6 401 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 POLMQ9NP87 494 aaPredicted RBP19.78■□□□□ 0.76
COL5A1-203ENST00000460264 SFMBT1Q9UHJ3 866 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 FBXO10Q9UK96 956 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 INVSQ9Y283 1065 aa19.78■□□□□ 0.76
COL5A1-203ENST00000460264 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
COL5A1-203ENST00000460264 MSI1O43347 362 aaKnown RBP19.77■□□□□ 0.76
COL5A1-203ENST00000460264 SLC9A1P19634 815 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 MTIF2P46199 727 aaKnown RBP19.77■□□□□ 0.76
COL5A1-203ENST00000460264 MFAP3P55082 362 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 ELF2Q15723 593 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 TPD52L1Q16890 204 aaPredicted RBP19.77■□□□□ 0.76
COL5A1-203ENST00000460264 GJB7Q6PEY0 223 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 OLIG1Q8TAK6 271 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 ARRDC1-AS1Q9H2J1 176 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 THAP9Q9H5L6 903 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 APEX2Q9UBZ4 518 aa19.77■□□□□ 0.76
COL5A1-203ENST00000460264 CDV3Q9UKY7 258 aaKnown RBP19.77■□□□□ 0.76
COL5A1-203ENST00000460264 TNRC6BQ9UPQ9 1833 aaKnown RBP19.76■□□□□ 0.75
COL5A1-203ENST00000460264 TCRBV21S2A2A0A5A6 115 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 FBXO21O94952 628 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 LETM1O95202 739 aaPredicted RBP19.76■□□□□ 0.75
COL5A1-203ENST00000460264 LTFP02788 710 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 HOXB2P14652 356 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 NTSR1P30989 418 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 GPD2P43304 727 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 HARS2P49590 506 aaKnown RBP19.76■□□□□ 0.75
COL5A1-203ENST00000460264 APBA1Q02410 837 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 MEA1Q16626 185 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 EXOC3L4Q17RC7 722 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 DENND1BQ6P3S1 775 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 HMGB4Q8WW32 186 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 FAM81BQ96LP2 452 aa19.76■□□□□ 0.75
COL5A1-203ENST00000460264 ACOX2Q99424 681 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms