RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 PRSS55Q6UWB4 352 aaPredicted RBP12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 JOSD2Q8TAC2 188 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 PBKQ96KB5 322 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 BTBD6Q96KE9 485 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 B3GALT6Q96L58 329 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 EMILIN2Q9BXX0 1053 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 CARD9Q9H257 536 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 GOLPH3Q9H4A6 298 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 ABI2Q9NYB9 513 aaPredicted RBP12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 FNIP2Q9P278 1114 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 USP3Q9Y6I4 520 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 GPR179Q6PRD1 2367 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
AC009404.1-202ENST00000439955 CHD6Q8TD26 2715 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 F8VP50 259 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 DDX3YO15523 660 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 PSTPIP1O43586 416 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 DAB1O75553 588 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 RFPL2O75678 378 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 SPATA31D3P0C874 917 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 LCP1P13796 627 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 GPD1P21695 349 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 TKTL1P51854 596 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 DAOAP59103 153 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 OGDHQ02218 1023 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 LMNB2Q03252 620 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 CKAP4Q07065 602 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 PM20D1Q6GTS8 502 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 TSSK4Q6SA08 328 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 SPATA31D4Q6ZUB0 917 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 BEND5Q7L4P6 421 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 PIWIL1Q96J94 861 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 KCNK16Q96T55 309 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 CNPY3Q9BT09 278 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 RHOBTB2Q9BYZ6 727 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 RXFP1Q9HBX9 757 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 WDR6Q9NNW5 1121 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 PARD6AQ9NPB6 346 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 MRPL17Q9NRX2 175 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 COMMD8Q9NX08 183 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 EPS15L1Q9UBC2 864 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 MTF2Q9Y483 593 aaPredicted RBP12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 PCDHA3Q9Y5H8 950 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 CDY1Q9Y6F8 540 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 CLUHO75153 1309 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
AC009404.1-202ENST00000439955 WDR27A2RRH5 827 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PRR5-ARHGAP8B1AHC4 643 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 TNFRSF10BO14763 440 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 LAMTOR5O43504 91 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 ABLIM3O94929 683 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 GJB6O95452 261 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 ZBED1O96006 694 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 HAPLN1P10915 354 aaPredicted RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PDGFRAP16234 1089 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 CYP2F1P24903 491 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PSMA2P25787 234 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 SDC4P31431 198 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 FLT3P36888 993 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 GRIK1P39086 918 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RPL10AP62906 217 aaKnown RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 ARHGAP8P85298 464 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RAB33AQ14088 237 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PPM1JQ5JR12 505 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RSPO2Q6UXX9 243 aaPredicted RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RNF19BQ6ZMZ0 732 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 GET4Q7L5D6 327 aaPredicted RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 GPRIN1Q7Z2K8 1008 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RHOT1Q8IXI2 618 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RXFP2Q8WXD0 754 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 SPATA17Q96L03 361 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 SLC2A13Q96QE2 648 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 CLSTN3Q9BQT9 956 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RTKNQ9BST9 563 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RPP25Q9BUL9 199 aaKnown RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 DDX23Q9BUQ8 820 aaKnown RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 ULBP1Q9BZM6 244 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 TMEM51Q9NW97 253 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 RRN3Q9NYV6 651 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 IL37Q9NZH6 218 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 TTC7AQ9ULT0 858 aaPredicted RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PACSIN2Q9UNF0 486 aaPredicted RBP12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 NUMBLQ9Y6R0 609 aa12.24□□□□□ -0.45
AC009404.1-202ENST00000439955 PIK3R2O00459 728 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms