RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 DRD1P21728 446 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PDIA3P30101 505 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PBX1P40424 430 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 GSTM5P46439 218 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PTK2BQ14289 1009 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 CSHL1Q14406 222 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PFKFB4Q16877 469 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 C4orf46Q504U0 113 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 COLEC12Q5KU26 742 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 CLASRPQ8N2M8 674 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 LINC01465Q8N7H1 131 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 LTV1Q96GA3 475 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 RMDN3Q96TC7 470 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 EIF3CQ99613 913 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 SH3BP4Q9P0V3 963 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 LPAR3Q9UBY5 353 aa4.26□□□□□ -1.73
TRAPPC13-204ENST00000438419 PNMA6EA0A0J9YXQ4 647 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 LGALS16A8MUM7 142 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 DHHO43323 396 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 ASNA1O43681 348 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 EXOC3O60645 756 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 NBNO60934 754 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 C1RP00736 705 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 CSTBP04080 98 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 MMP8P22894 467 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 RENBPP51606 427 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 POLE2P56282 527 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 DEUP1Q05D60 604 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 DNASE1L3Q13609 305 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 PDCD2Q16342 344 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 TMEM196Q5HYL7 178 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 FAM90A2PQ658T7 463 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 FCRLBQ6BAA4 426 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 GRHL2Q6ISB3 625 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 GGT6Q6P531 493 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 BCDIN3DQ7Z5W3 292 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 NRSN1Q8IZ57 195 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 C12orf76Q8N812 135 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 DPF1Q92782 380 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 EID2BQ96D98 161 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 FYTTD1Q96QD9 318 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 TP63Q9H3D4 680 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 GAR1Q9NY12 217 aaKnown RBP4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 NFU1Q9UMS0 254 aa4.25□□□□□ -1.73
TRAPPC13-204ENST00000438419 hCG_1642624A0A1W2PR95 340 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 BTBD19C9JJ37 291 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 UBE2Q2LH0YL09 131 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 MASP2O00187 686 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 ANXA6P08133 673 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 TMIGD3P0DMS9 266 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 APEHP13798 732 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 SERPINF1P36955 418 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 COPB1P53618 953 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 C21orf58P58505 322 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 CFHR3Q02985 330 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC15Q0P6D6 951 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 GALNT1Q10472 559 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 SEMA3BQ13214 749 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 BFSP2Q13515 415 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 ELF2Q15723 593 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 P3H1Q32P28 736 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC38Q502W7 563 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC144NLQ6NUI1 221 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 SYCE2Q6PIF2 218 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC174Q6PII3 467 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 SERPINA13PQ6UXR4 307 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 ANKRD42Q8N9B4 389 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 FAM71DQ8N9W8 422 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 STYXQ8WUJ0 223 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 WDR60Q8WVS4 1066 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 RSC1A1Q92681 617 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 EDC3Q96F86 508 aaKnown RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 KATNAL1Q9BW62 490 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 DACT1Q9NYF0 836 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 ASAP1Q9ULH1 1129 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 MORC2Q9Y6X9 1032 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 PCSK5Q92824 1860 aa4.24□□□□□ -1.73
TRAPPC13-204ENST00000438419 GXYLT2A0PJZ3 443 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 MANSC4A6NHS7 340 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CA12O43570 354 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 GCATO75600 419 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 USP1O94782 785 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 MT-CO3P00414 261 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 ITGA2BP08514 1039 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CHRM5P08912 532 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 MATN1P21941 496 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 LMO1P25800 156 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CD38P28907 300 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 HALP42357 657 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 GPC5P78333 572 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 FOXO1Q12778 655 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 CERKLQ49MI3 558 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 INO80DQ53TQ3 878 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC13-204ENST00000438419 PIK3AP1Q6ZUJ8 805 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms